Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga1P17095 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga1P17095 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.67■□□□□ 0.58
Hmga1P17095 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.67■□□□□ 0.58
Hmga1P17095 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga1P17095 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga1P17095 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.67■□□□□ 0.58
Hmga1P17095 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmga1P17095 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hmga1P17095 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmga1P17095 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Hmga1P17095 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmga1P17095 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmga1P17095 Mir6349-201ENSMUST00000184059 97 ntBASIC18.66■□□□□ 0.58
Hmga1P17095 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.66■□□□□ 0.58
Hmga1P17095 Gm37292-201ENSMUST00000192062 758 ntBASIC18.66■□□□□ 0.58
Hmga1P17095 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmga1P17095 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hmga1P17095 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmga1P17095 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hmga1P17095 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmga1P17095 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmga1P17095 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hmga1P17095 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmga1P17095 Golph3-205ENSMUST00000228671 2842 ntBASIC18.65■□□□□ 0.58
Hmga1P17095 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga1P17095 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga1P17095 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga1P17095 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.65■□□□□ 0.58
Hmga1P17095 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga1P17095 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga1P17095 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hmga1P17095 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga1P17095 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga1P17095 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmga1P17095 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hmga1P17095 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hmga1P17095 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Hmga1P17095 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Hmga1P17095 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.64■□□□□ 0.57
Hmga1P17095 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmga1P17095 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmga1P17095 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmga1P17095 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Hmga1P17095 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmga1P17095 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmga1P17095 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.64■□□□□ 0.57
Hmga1P17095 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.64■□□□□ 0.57
Hmga1P17095 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Hmga1P17095 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.64■□□□□ 0.57
Hmga1P17095 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hmga1P17095 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.64■□□□□ 0.57
Hmga1P17095 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmga1P17095 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmga1P17095 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmga1P17095 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmga1P17095 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmga1P17095 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmga1P17095 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmga1P17095 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Hmga1P17095 Mir7071-201ENSMUST00000184847 69 ntBASIC18.63■□□□□ 0.57
Hmga1P17095 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmga1P17095 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmga1P17095 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmga1P17095 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Hmga1P17095 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmga1P17095 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmga1P17095 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Hmga1P17095 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hmga1P17095 Mir5122-201ENSMUST00000175004 89 ntBASIC18.62■□□□□ 0.57
Hmga1P17095 Mir2861-201ENSMUST00000175539 82 ntBASIC18.62■□□□□ 0.57
Hmga1P17095 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Hmga1P17095 Gm37055-201ENSMUST00000191866 133 ntBASIC18.62■□□□□ 0.57
Hmga1P17095 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmga1P17095 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hmga1P17095 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Hmga1P17095 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmga1P17095 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmga1P17095 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga1P17095 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hmga1P17095 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga1P17095 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hmga1P17095 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Hmga1P17095 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga1P17095 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga1P17095 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga1P17095 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga1P17095 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga1P17095 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga1P17095 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga1P17095 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga1P17095 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga1P17095 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga1P17095 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmga1P17095 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga1P17095 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga1P17095 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmga1P17095 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.6■□□□□ 0.57
Hmga1P17095 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Hmga1P17095 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms