Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sod1P08228 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sod1P08228 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.21■□□□□ 0.35
Sod1P08228 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sod1P08228 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sod1P08228 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sod1P08228 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.2■□□□□ 0.34
Sod1P08228 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sod1P08228 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sod1P08228 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.2■□□□□ 0.34
Sod1P08228 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sod1P08228 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sod1P08228 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sod1P08228 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sod1P08228 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sod1P08228 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sod1P08228 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sod1P08228 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sod1P08228 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sod1P08228 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sod1P08228 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sod1P08228 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sod1P08228 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sod1P08228 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sod1P08228 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sod1P08228 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sod1P08228 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sod1P08228 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sod1P08228 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sod1P08228 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sod1P08228 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sod1P08228 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sod1P08228 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.18■□□□□ 0.34
Sod1P08228 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.18■□□□□ 0.34
Sod1P08228 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.18■□□□□ 0.34
Sod1P08228 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.18■□□□□ 0.34
Sod1P08228 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sod1P08228 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sod1P08228 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.18■□□□□ 0.34
Sod1P08228 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sod1P08228 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sod1P08228 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sod1P08228 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sod1P08228 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sod1P08228 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sod1P08228 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sod1P08228 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sod1P08228 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sod1P08228 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sod1P08228 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sod1P08228 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sod1P08228 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Sod1P08228 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sod1P08228 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sod1P08228 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sod1P08228 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sod1P08228 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Sod1P08228 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sod1P08228 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sod1P08228 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sod1P08228 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.16■□□□□ 0.34
Sod1P08228 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sod1P08228 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sod1P08228 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sod1P08228 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.16■□□□□ 0.34
Sod1P08228 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.16■□□□□ 0.34
Sod1P08228 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Sod1P08228 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sod1P08228 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sod1P08228 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sod1P08228 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sod1P08228 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sod1P08228 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sod1P08228 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.15■□□□□ 0.34
Sod1P08228 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sod1P08228 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.15■□□□□ 0.34
Sod1P08228 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sod1P08228 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sod1P08228 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sod1P08228 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sod1P08228 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sod1P08228 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.15■□□□□ 0.34
Sod1P08228 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sod1P08228 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sod1P08228 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sod1P08228 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sod1P08228 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sod1P08228 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sod1P08228 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Sod1P08228 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sod1P08228 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sod1P08228 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sod1P08228 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sod1P08228 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sod1P08228 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sod1P08228 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sod1P08228 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sod1P08228 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.14■□□□□ 0.33
Sod1P08228 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sod1P08228 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms