Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PdgfrbP05622 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PdgfrbP05622 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PdgfrbP05622 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PdgfrbP05622 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PdgfrbP05622 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PdgfrbP05622 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PdgfrbP05622 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PdgfrbP05622 Gm22325-201ENSMUST00000158904 308 ntBASIC18.36■□□□□ 0.53
PdgfrbP05622 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.36■□□□□ 0.53
PdgfrbP05622 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.36■□□□□ 0.53
PdgfrbP05622 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.36■□□□□ 0.53
PdgfrbP05622 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.36■□□□□ 0.53
PdgfrbP05622 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PdgfrbP05622 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PdgfrbP05622 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PdgfrbP05622 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PdgfrbP05622 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PdgfrbP05622 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PdgfrbP05622 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PdgfrbP05622 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.35■□□□□ 0.53
PdgfrbP05622 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.35■□□□□ 0.53
PdgfrbP05622 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PdgfrbP05622 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PdgfrbP05622 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.34■□□□□ 0.53
PdgfrbP05622 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PdgfrbP05622 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PdgfrbP05622 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.34■□□□□ 0.53
PdgfrbP05622 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PdgfrbP05622 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PdgfrbP05622 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PdgfrbP05622 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PdgfrbP05622 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PdgfrbP05622 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.34■□□□□ 0.53
PdgfrbP05622 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PdgfrbP05622 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PdgfrbP05622 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
PdgfrbP05622 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
PdgfrbP05622 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.34■□□□□ 0.53
PdgfrbP05622 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PdgfrbP05622 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PdgfrbP05622 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PdgfrbP05622 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PdgfrbP05622 Grk6-206ENSMUST00000224995 2971 ntBASIC18.33■□□□□ 0.53
PdgfrbP05622 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PdgfrbP05622 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.33■□□□□ 0.53
PdgfrbP05622 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PdgfrbP05622 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PdgfrbP05622 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PdgfrbP05622 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PdgfrbP05622 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PdgfrbP05622 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PdgfrbP05622 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.33■□□□□ 0.52
PdgfrbP05622 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PdgfrbP05622 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PdgfrbP05622 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PdgfrbP05622 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PdgfrbP05622 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PdgfrbP05622 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PdgfrbP05622 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PdgfrbP05622 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PdgfrbP05622 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.32■□□□□ 0.52
PdgfrbP05622 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PdgfrbP05622 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PdgfrbP05622 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PdgfrbP05622 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PdgfrbP05622 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PdgfrbP05622 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PdgfrbP05622 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.32■□□□□ 0.52
PdgfrbP05622 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PdgfrbP05622 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PdgfrbP05622 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PdgfrbP05622 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PdgfrbP05622 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PdgfrbP05622 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PdgfrbP05622 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PdgfrbP05622 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PdgfrbP05622 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PdgfrbP05622 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PdgfrbP05622 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PdgfrbP05622 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PdgfrbP05622 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PdgfrbP05622 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms