Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01878 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
P01878 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.84■□□□□ 0.61
P01878 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
P01878 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01878 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
P01878 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01878 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01878 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
P01878 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01878 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
P01878 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01878 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
P01878 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.83■□□□□ 0.6
P01878 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01878 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01878 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01878 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01878 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P01878 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.83■□□□□ 0.6
P01878 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01878 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
P01878 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01878 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
P01878 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
P01878 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01878 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.82■□□□□ 0.6
P01878 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P01878 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
P01878 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01878 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01878 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01878 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01878 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01878 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01878 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
P01878 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01878 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
P01878 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01878 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.81■□□□□ 0.6
P01878 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01878 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
P01878 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01878 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.81■□□□□ 0.6
P01878 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
P01878 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.81■□□□□ 0.6
P01878 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01878 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.81■□□□□ 0.6
P01878 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01878 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01878 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
P01878 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
P01878 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
P01878 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01878 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
P01878 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01878 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
P01878 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01878 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.8■□□□□ 0.6
P01878 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01878 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01878 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
P01878 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01878 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01878 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.8■□□□□ 0.6
P01878 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01878 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01878 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01878 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01878 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01878 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.79■□□□□ 0.6
P01878 Gm7889-201ENSMUST00000185591 958 ntBASIC18.79■□□□□ 0.6
P01878 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
P01878 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P01878 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.79■□□□□ 0.6
P01878 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01878 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01878 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
P01878 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01878 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01878 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
P01878 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01878 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01878 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01878 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
P01878 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.78■□□□□ 0.6
P01878 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.78■□□□□ 0.6
P01878 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01878 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01878 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.78■□□□□ 0.6
P01878 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01878 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.78■□□□□ 0.6
P01878 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01878 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01878 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01878 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
P01878 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
P01878 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P01878 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P01878 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms