Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TcraP01849 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TcraP01849 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.3□□□□□ -0.28
TcraP01849 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TcraP01849 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TcraP01849 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TcraP01849 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.3□□□□□ -0.28
TcraP01849 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
TcraP01849 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TcraP01849 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TcraP01849 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TcraP01849 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TcraP01849 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TcraP01849 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TcraP01849 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TcraP01849 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TcraP01849 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TcraP01849 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TcraP01849 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TcraP01849 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TcraP01849 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TcraP01849 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TcraP01849 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TcraP01849 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TcraP01849 Gm22238-201ENSMUST00000175222 88 ntBASIC13.29□□□□□ -0.28
TcraP01849 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.29□□□□□ -0.28
TcraP01849 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.29□□□□□ -0.28
TcraP01849 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.29□□□□□ -0.28
TcraP01849 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TcraP01849 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TcraP01849 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TcraP01849 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TcraP01849 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TcraP01849 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TcraP01849 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.28□□□□□ -0.28
TcraP01849 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.28□□□□□ -0.28
TcraP01849 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.28□□□□□ -0.28
TcraP01849 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.28□□□□□ -0.28
TcraP01849 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.28□□□□□ -0.28
TcraP01849 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.28□□□□□ -0.28
TcraP01849 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TcraP01849 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TcraP01849 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TcraP01849 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TcraP01849 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TcraP01849 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TcraP01849 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.27□□□□□ -0.28
TcraP01849 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TcraP01849 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.27□□□□□ -0.29
TcraP01849 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TcraP01849 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.27□□□□□ -0.29
TcraP01849 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TcraP01849 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TcraP01849 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TcraP01849 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.27□□□□□ -0.29
TcraP01849 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TcraP01849 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TcraP01849 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TcraP01849 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TcraP01849 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TcraP01849 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TcraP01849 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TcraP01849 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TcraP01849 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TcraP01849 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TcraP01849 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.26□□□□□ -0.29
TcraP01849 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.26□□□□□ -0.29
TcraP01849 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.26□□□□□ -0.29
TcraP01849 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.26□□□□□ -0.29
TcraP01849 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TcraP01849 Gm14117-201ENSMUST00000122417 843 ntBASIC13.26□□□□□ -0.29
TcraP01849 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TcraP01849 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms