Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ifnb1P01575 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.21■□□□□ 0.67
Ifnb1P01575 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ifnb1P01575 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.21■□□□□ 0.67
Ifnb1P01575 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.21■□□□□ 0.67
Ifnb1P01575 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ifnb1P01575 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ifnb1P01575 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.21■□□□□ 0.67
Ifnb1P01575 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ifnb1P01575 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ifnb1P01575 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Ifnb1P01575 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ifnb1P01575 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.2■□□□□ 0.66
Ifnb1P01575 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Ifnb1P01575 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifnb1P01575 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ifnb1P01575 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ifnb1P01575 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Ifnb1P01575 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ifnb1P01575 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ifnb1P01575 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.19■□□□□ 0.66
Ifnb1P01575 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ifnb1P01575 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ifnb1P01575 Gm26571-201ENSMUST00000181399 666 ntBASIC19.19■□□□□ 0.66
Ifnb1P01575 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ifnb1P01575 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ifnb1P01575 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ifnb1P01575 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ifnb1P01575 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.19■□□□□ 0.66
Ifnb1P01575 Tgds-204ENSMUST00000228543 1594 ntBASIC19.19■□□□□ 0.66
Ifnb1P01575 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Ifnb1P01575 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ifnb1P01575 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.18■□□□□ 0.66
Ifnb1P01575 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ifnb1P01575 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ifnb1P01575 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.18■□□□□ 0.66
Ifnb1P01575 Gm22325-201ENSMUST00000158904 308 ntBASIC19.18■□□□□ 0.66
Ifnb1P01575 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.18■□□□□ 0.66
Ifnb1P01575 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.18■□□□□ 0.66
Ifnb1P01575 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ifnb1P01575 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ifnb1P01575 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ifnb1P01575 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ifnb1P01575 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ifnb1P01575 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ifnb1P01575 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ifnb1P01575 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.17■□□□□ 0.66
Ifnb1P01575 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ifnb1P01575 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ifnb1P01575 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ifnb1P01575 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ifnb1P01575 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ifnb1P01575 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ifnb1P01575 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ifnb1P01575 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Ifnb1P01575 Gm10849-201ENSMUST00000100397 618 ntBASIC19.16■□□□□ 0.66
Ifnb1P01575 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.16■□□□□ 0.66
Ifnb1P01575 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Ifnb1P01575 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ifnb1P01575 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ifnb1P01575 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ifnb1P01575 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ifnb1P01575 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ifnb1P01575 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ifnb1P01575 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ifnb1P01575 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.15■□□□□ 0.66
Ifnb1P01575 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ifnb1P01575 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ifnb1P01575 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ifnb1P01575 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.15■□□□□ 0.66
Ifnb1P01575 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ifnb1P01575 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ifnb1P01575 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ifnb1P01575 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ifnb1P01575 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ifnb1P01575 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ifnb1P01575 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ifnb1P01575 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ifnb1P01575 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ifnb1P01575 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ifnb1P01575 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ifnb1P01575 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ifnb1P01575 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ifnb1P01575 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ifnb1P01575 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms