Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vti1aO89116 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vti1aO89116 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.62■□□□□ 0.73
Vti1aO89116 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Vti1aO89116 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vti1aO89116 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vti1aO89116 Gm2399-201ENSMUST00000104944 225 ntBASIC19.62■□□□□ 0.73
Vti1aO89116 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Vti1aO89116 Gm11249-201ENSMUST00000117071 859 ntBASIC19.62■□□□□ 0.73
Vti1aO89116 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vti1aO89116 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.62■□□□□ 0.73
Vti1aO89116 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vti1aO89116 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.62■□□□□ 0.73
Vti1aO89116 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vti1aO89116 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vti1aO89116 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vti1aO89116 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vti1aO89116 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1aO89116 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1aO89116 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1aO89116 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1aO89116 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1aO89116 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.61■□□□□ 0.73
Vti1aO89116 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1aO89116 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.61■□□□□ 0.73
Vti1aO89116 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Vti1aO89116 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.61■□□□□ 0.73
Vti1aO89116 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Vti1aO89116 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.61■□□□□ 0.73
Vti1aO89116 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Vti1aO89116 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1aO89116 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.61■□□□□ 0.73
Vti1aO89116 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1aO89116 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1aO89116 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Vti1aO89116 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1aO89116 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vti1aO89116 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Vti1aO89116 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.6■□□□□ 0.73
Vti1aO89116 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.6■□□□□ 0.73
Vti1aO89116 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
Vti1aO89116 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Vti1aO89116 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.6■□□□□ 0.73
Vti1aO89116 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vti1aO89116 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Vti1aO89116 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1aO89116 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1aO89116 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1aO89116 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1aO89116 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.59■□□□□ 0.73
Vti1aO89116 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1aO89116 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1aO89116 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Vti1aO89116 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1aO89116 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1aO89116 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vti1aO89116 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Vti1aO89116 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vti1aO89116 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vti1aO89116 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Vti1aO89116 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Vti1aO89116 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vti1aO89116 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vti1aO89116 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.57■□□□□ 0.72
Vti1aO89116 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vti1aO89116 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vti1aO89116 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vti1aO89116 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vti1aO89116 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vti1aO89116 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vti1aO89116 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.57■□□□□ 0.72
Vti1aO89116 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vti1aO89116 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vti1aO89116 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Vti1aO89116 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.57■□□□□ 0.72
Vti1aO89116 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vti1aO89116 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Vti1aO89116 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Vti1aO89116 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vti1aO89116 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vti1aO89116 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vti1aO89116 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vti1aO89116 Gm15378-201ENSMUST00000121894 207 ntBASIC19.56■□□□□ 0.72
Vti1aO89116 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Vti1aO89116 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Vti1aO89116 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms