Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.59■□□□□ 0.57
ShdO88834 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ShdO88834 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
ShdO88834 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.59■□□□□ 0.57
ShdO88834 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ShdO88834 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ShdO88834 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
ShdO88834 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ShdO88834 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ShdO88834 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShdO88834 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
ShdO88834 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ShdO88834 Gm22325-201ENSMUST00000158904 308 ntBASIC18.58■□□□□ 0.56
ShdO88834 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.58■□□□□ 0.56
ShdO88834 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShdO88834 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShdO88834 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.58■□□□□ 0.56
ShdO88834 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShdO88834 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ShdO88834 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ShdO88834 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ShdO88834 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ShdO88834 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ShdO88834 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShdO88834 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ShdO88834 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ShdO88834 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShdO88834 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShdO88834 Mir5133-201ENSMUST00000174955 77 ntBASIC18.57■□□□□ 0.56
ShdO88834 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ShdO88834 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShdO88834 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShdO88834 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ShdO88834 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ShdO88834 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ShdO88834 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ShdO88834 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.57■□□□□ 0.56
ShdO88834 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShdO88834 Rarb-207ENSMUST00000225921 2756 ntBASIC18.56■□□□□ 0.56
ShdO88834 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.56■□□□□ 0.56
ShdO88834 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShdO88834 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ShdO88834 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShdO88834 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShdO88834 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ShdO88834 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ShdO88834 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShdO88834 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShdO88834 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShdO88834 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShdO88834 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.55■□□□□ 0.56
ShdO88834 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.55■□□□□ 0.56
ShdO88834 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ShdO88834 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ShdO88834 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShdO88834 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShdO88834 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ShdO88834 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShdO88834 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShdO88834 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ShdO88834 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShdO88834 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.55■□□□□ 0.56
ShdO88834 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShdO88834 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ShdO88834 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
ShdO88834 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShdO88834 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShdO88834 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShdO88834 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.54■□□□□ 0.56
ShdO88834 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ShdO88834 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShdO88834 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShdO88834 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShdO88834 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShdO88834 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ShdO88834 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShdO88834 Gm26524-201ENSMUST00000192339 390 ntBASIC18.53■□□□□ 0.56
ShdO88834 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShdO88834 Tgds-204ENSMUST00000228543 1594 ntBASIC18.53■□□□□ 0.56
ShdO88834 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ShdO88834 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShdO88834 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ShdO88834 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShdO88834 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShdO88834 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShdO88834 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ShdO88834 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.52■□□□□ 0.56
ShdO88834 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.52■□□□□ 0.56
ShdO88834 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.52■□□□□ 0.56
ShdO88834 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ShdO88834 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ShdO88834 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.52■□□□□ 0.55
ShdO88834 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ShdO88834 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ShdO88834 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms