Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hcn3O88705 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcn3O88705 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcn3O88705 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn3O88705 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn3O88705 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.41■□□□□ 0.38
Hcn3O88705 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn3O88705 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn3O88705 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.41■□□□□ 0.38
Hcn3O88705 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Hcn3O88705 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn3O88705 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn3O88705 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn3O88705 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn3O88705 Gm43173-201ENSMUST00000202246 593 ntBASIC17.41■□□□□ 0.38
Hcn3O88705 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn3O88705 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Hcn3O88705 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn3O88705 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn3O88705 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn3O88705 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn3O88705 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn3O88705 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hcn3O88705 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hcn3O88705 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.4■□□□□ 0.38
Hcn3O88705 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn3O88705 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.4■□□□□ 0.38
Hcn3O88705 Gm15039-201ENSMUST00000118914 875 ntBASIC17.4■□□□□ 0.38
Hcn3O88705 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.4■□□□□ 0.38
Hcn3O88705 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Hcn3O88705 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hcn3O88705 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn3O88705 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn3O88705 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn3O88705 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hcn3O88705 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn3O88705 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn3O88705 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hcn3O88705 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hcn3O88705 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hcn3O88705 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn3O88705 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn3O88705 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.39■□□□□ 0.37
Hcn3O88705 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn3O88705 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn3O88705 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.39■□□□□ 0.37
Hcn3O88705 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn3O88705 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn3O88705 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hcn3O88705 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn3O88705 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn3O88705 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Hcn3O88705 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.39■□□□□ 0.37
Hcn3O88705 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn3O88705 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn3O88705 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn3O88705 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.38■□□□□ 0.37
Hcn3O88705 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn3O88705 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn3O88705 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn3O88705 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hcn3O88705 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn3O88705 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.37■□□□□ 0.37
Hcn3O88705 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hcn3O88705 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn3O88705 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hcn3O88705 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn3O88705 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn3O88705 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.37■□□□□ 0.37
Hcn3O88705 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn3O88705 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn3O88705 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hcn3O88705 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn3O88705 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn3O88705 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn3O88705 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn3O88705 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.37■□□□□ 0.37
Hcn3O88705 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn3O88705 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn3O88705 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Hcn3O88705 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hcn3O88705 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcn3O88705 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hcn3O88705 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcn3O88705 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.36■□□□□ 0.37
Hcn3O88705 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hcn3O88705 Gm43017-201ENSMUST00000198296 752 ntBASIC17.36■□□□□ 0.37
Hcn3O88705 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hcn3O88705 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcn3O88705 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn3O88705 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn3O88705 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn3O88705 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Hcn3O88705 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn3O88705 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.35■□□□□ 0.37
Hcn3O88705 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Hcn3O88705 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn3O88705 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hcn3O88705 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn3O88705 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms