Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20bO88575 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.93■□□□□ 0.78
Slc6a20bO88575 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.93■□□□□ 0.78
Slc6a20bO88575 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20bO88575 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20bO88575 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20bO88575 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc6a20bO88575 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Slc6a20bO88575 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a20bO88575 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a20bO88575 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a20bO88575 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a20bO88575 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a20bO88575 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a20bO88575 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.92■□□□□ 0.78
Slc6a20bO88575 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a20bO88575 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a20bO88575 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc6a20bO88575 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20bO88575 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.91■□□□□ 0.78
Slc6a20bO88575 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Gm2274-201ENSMUST00000184539 609 ntBASIC19.91■□□□□ 0.78
Slc6a20bO88575 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Slc6a20bO88575 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.9■□□□□ 0.78
Slc6a20bO88575 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc6a20bO88575 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.9■□□□□ 0.78
Slc6a20bO88575 Gm22697-201ENSMUST00000175194 63 ntBASIC19.9■□□□□ 0.78
Slc6a20bO88575 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.9■□□□□ 0.78
Slc6a20bO88575 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc6a20bO88575 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc6a20bO88575 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.9■□□□□ 0.78
Slc6a20bO88575 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slc6a20bO88575 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.9■□□□□ 0.78
Slc6a20bO88575 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slc6a20bO88575 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.9■□□□□ 0.78
Slc6a20bO88575 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc6a20bO88575 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Slc6a20bO88575 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Slc6a20bO88575 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc6a20bO88575 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc6a20bO88575 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Slc6a20bO88575 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc6a20bO88575 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc6a20bO88575 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Slc6a20bO88575 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.89■□□□□ 0.77
Slc6a20bO88575 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Slc6a20bO88575 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc6a20bO88575 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc6a20bO88575 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc6a20bO88575 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Slc6a20bO88575 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc6a20bO88575 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc6a20bO88575 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Slc6a20bO88575 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc6a20bO88575 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc6a20bO88575 Gm7284-201ENSMUST00000131667 944 ntBASIC19.88■□□□□ 0.77
Slc6a20bO88575 Gm17661-201ENSMUST00000170317 270 ntBASIC19.88■□□□□ 0.77
Slc6a20bO88575 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Slc6a20bO88575 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc6a20bO88575 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc6a20bO88575 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
Slc6a20bO88575 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc6a20bO88575 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc6a20bO88575 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Slc6a20bO88575 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc6a20bO88575 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc6a20bO88575 Gm17971-201ENSMUST00000190239 806 ntBASIC19.87■□□□□ 0.77
Slc6a20bO88575 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc6a20bO88575 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.87■□□□□ 0.77
Slc6a20bO88575 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc6a20bO88575 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc6a20bO88575 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc6a20bO88575 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc6a20bO88575 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc6a20bO88575 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Slc6a20bO88575 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc6a20bO88575 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.86■□□□□ 0.77
Slc6a20bO88575 Notumos-201ENSMUST00000151998 2659 ntBASIC19.86■□□□□ 0.77
Slc6a20bO88575 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc6a20bO88575 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Slc6a20bO88575 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc6a20bO88575 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Slc6a20bO88575 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc6a20bO88575 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc6a20bO88575 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms