Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gm3375-201ENSMUST00000203929 796 ntBASIC17.33■□□□□ 0.36
Tgfbr3O88393 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfbr3O88393 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfbr3O88393 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tgfbr3O88393 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfbr3O88393 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tgfbr3O88393 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tgfbr3O88393 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Mir6349-201ENSMUST00000184059 97 ntBASIC17.31■□□□□ 0.36
Tgfbr3O88393 Gm7889-201ENSMUST00000185591 958 ntBASIC17.31■□□□□ 0.36
Tgfbr3O88393 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tgfbr3O88393 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.3■□□□□ 0.36
Tgfbr3O88393 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.3■□□□□ 0.36
Tgfbr3O88393 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr3O88393 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Tgfbr3O88393 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tgfbr3O88393 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tgfbr3O88393 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.29■□□□□ 0.36
Tgfbr3O88393 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.29■□□□□ 0.36
Tgfbr3O88393 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tgfbr3O88393 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tgfbr3O88393 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tgfbr3O88393 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.28■□□□□ 0.36
Tgfbr3O88393 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Tgfbr3O88393 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tgfbr3O88393 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tgfbr3O88393 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tgfbr3O88393 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tgfbr3O88393 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tgfbr3O88393 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Tgfbr3O88393 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tgfbr3O88393 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tgfbr3O88393 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.27■□□□□ 0.36
Tgfbr3O88393 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.27■□□□□ 0.36
Tgfbr3O88393 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.27■□□□□ 0.36
Tgfbr3O88393 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.27■□□□□ 0.36
Tgfbr3O88393 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tgfbr3O88393 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tgfbr3O88393 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tgfbr3O88393 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Tgfbr3O88393 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms