Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Ttc3O88196 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc3O88196 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc3O88196 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc3O88196 Gm21814-202ENSMUST00000203277 873 ntBASIC19.16■□□□□ 0.66
Ttc3O88196 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.16■□□□□ 0.66
Ttc3O88196 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc3O88196 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc3O88196 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc3O88196 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc3O88196 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.16■□□□□ 0.66
Ttc3O88196 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc3O88196 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc3O88196 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc3O88196 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc3O88196 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc3O88196 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.15■□□□□ 0.66
Ttc3O88196 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc3O88196 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc3O88196 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ttc3O88196 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.15■□□□□ 0.66
Ttc3O88196 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ttc3O88196 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.15■□□□□ 0.66
Ttc3O88196 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ttc3O88196 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ttc3O88196 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc3O88196 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.14■□□□□ 0.65
Ttc3O88196 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ttc3O88196 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc3O88196 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc3O88196 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc3O88196 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc3O88196 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ttc3O88196 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc3O88196 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.14■□□□□ 0.65
Ttc3O88196 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc3O88196 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc3O88196 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc3O88196 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.13■□□□□ 0.65
Ttc3O88196 Gm3375-201ENSMUST00000203929 796 ntBASIC19.13■□□□□ 0.65
Ttc3O88196 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc3O88196 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.13■□□□□ 0.65
Ttc3O88196 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc3O88196 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ttc3O88196 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ttc3O88196 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ttc3O88196 Gm11643-201ENSMUST00000119578 864 ntBASIC19.13■□□□□ 0.65
Ttc3O88196 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ttc3O88196 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.13■□□□□ 0.65
Ttc3O88196 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ttc3O88196 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ttc3O88196 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.13■□□□□ 0.65
Ttc3O88196 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc3O88196 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ttc3O88196 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.13■□□□□ 0.65
Ttc3O88196 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Ttc3O88196 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc3O88196 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ttc3O88196 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc3O88196 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc3O88196 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc3O88196 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc3O88196 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc3O88196 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc3O88196 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc3O88196 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ttc3O88196 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc3O88196 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc3O88196 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc3O88196 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ttc3O88196 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc3O88196 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.12■□□□□ 0.65
Ttc3O88196 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc3O88196 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc3O88196 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc3O88196 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.12■□□□□ 0.65
Ttc3O88196 Golph3-205ENSMUST00000228671 2842 ntBASIC19.12■□□□□ 0.65
Ttc3O88196 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc3O88196 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Ttc3O88196 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.12■□□□□ 0.65
Ttc3O88196 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc3O88196 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc3O88196 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc3O88196 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc3O88196 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ttc3O88196 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc3O88196 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc3O88196 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc3O88196 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc3O88196 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc3O88196 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc3O88196 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc3O88196 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Ttc3O88196 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.11■□□□□ 0.65
Ttc3O88196 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc3O88196 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc3O88196 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc3O88196 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ttc3O88196 Mir2861-201ENSMUST00000175539 82 ntBASIC19.1■□□□□ 0.65
Ttc3O88196 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms