Protein–RNA interactions for Protein: O88174

Cd46, Membrane cofactor protein, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd46O88174 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.42■□□□□ 0.22
Cd46O88174 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd46O88174 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cd46O88174 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cd46O88174 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd46O88174 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd46O88174 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Cd46O88174 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd46O88174 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.41■□□□□ 0.22
Cd46O88174 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.41■□□□□ 0.22
Cd46O88174 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cd46O88174 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd46O88174 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd46O88174 Odf3b-204ENSMUST00000227834 930 ntBASIC16.41■□□□□ 0.22
Cd46O88174 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.41■□□□□ 0.22
Cd46O88174 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cd46O88174 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd46O88174 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd46O88174 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cd46O88174 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.41■□□□□ 0.22
Cd46O88174 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cd46O88174 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd46O88174 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd46O88174 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cd46O88174 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.4■□□□□ 0.22
Cd46O88174 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd46O88174 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cd46O88174 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.39■□□□□ 0.22
Cd46O88174 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cd46O88174 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd46O88174 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd46O88174 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cd46O88174 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.39■□□□□ 0.21
Cd46O88174 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Cd46O88174 Gm13559-201ENSMUST00000120476 863 ntBASIC16.39■□□□□ 0.21
Cd46O88174 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.39■□□□□ 0.21
Cd46O88174 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cd46O88174 Gm38285-201ENSMUST00000192928 922 ntBASIC16.39■□□□□ 0.21
Cd46O88174 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.39■□□□□ 0.21
Cd46O88174 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.39■□□□□ 0.21
Cd46O88174 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cd46O88174 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.39■□□□□ 0.21
Cd46O88174 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd46O88174 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd46O88174 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd46O88174 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd46O88174 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cd46O88174 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cd46O88174 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cd46O88174 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cd46O88174 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cd46O88174 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Cd46O88174 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.38■□□□□ 0.21
Cd46O88174 Gm42545-201ENSMUST00000202755 922 ntBASIC16.38■□□□□ 0.21
Cd46O88174 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.38■□□□□ 0.21
Cd46O88174 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.38■□□□□ 0.21
Cd46O88174 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.38■□□□□ 0.21
Cd46O88174 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Cd46O88174 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cd46O88174 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd46O88174 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd46O88174 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd46O88174 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cd46O88174 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd46O88174 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd46O88174 Gm37292-201ENSMUST00000192062 758 ntBASIC16.37■□□□□ 0.21
Cd46O88174 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.37■□□□□ 0.21
Cd46O88174 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cd46O88174 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.37■□□□□ 0.21
Cd46O88174 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd46O88174 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cd46O88174 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd46O88174 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cd46O88174 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.37■□□□□ 0.21
Cd46O88174 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd46O88174 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Cd46O88174 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd46O88174 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd46O88174 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cd46O88174 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cd46O88174 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd46O88174 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd46O88174 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cd46O88174 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.36■□□□□ 0.21
Cd46O88174 Gm11539-201ENSMUST00000119837 557 ntBASIC16.36■□□□□ 0.21
Cd46O88174 Gm13436-201ENSMUST00000120418 567 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms