Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Pdlim3O70209 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pdlim3O70209 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.5■□□□□ 0.23
Pdlim3O70209 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.5■□□□□ 0.23
Pdlim3O70209 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.5■□□□□ 0.23
Pdlim3O70209 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Pdlim3O70209 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim3O70209 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim3O70209 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim3O70209 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim3O70209 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim3O70209 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.49■□□□□ 0.23
Pdlim3O70209 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim3O70209 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim3O70209 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim3O70209 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim3O70209 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.49■□□□□ 0.23
Pdlim3O70209 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim3O70209 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim3O70209 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim3O70209 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.49■□□□□ 0.23
Pdlim3O70209 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim3O70209 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pdlim3O70209 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Pdlim3O70209 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Pdlim3O70209 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Gm21956-201ENSMUST00000179946 522 ntBASIC16.48■□□□□ 0.23
Pdlim3O70209 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.48■□□□□ 0.23
Pdlim3O70209 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Gm13241-201ENSMUST00000094493 780 ntBASIC16.48■□□□□ 0.23
Pdlim3O70209 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.48■□□□□ 0.23
Pdlim3O70209 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pdlim3O70209 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim3O70209 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.47■□□□□ 0.23
Pdlim3O70209 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim3O70209 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim3O70209 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim3O70209 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.47■□□□□ 0.23
Pdlim3O70209 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim3O70209 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.47■□□□□ 0.23
Pdlim3O70209 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
Pdlim3O70209 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Pdlim3O70209 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim3O70209 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim3O70209 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim3O70209 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim3O70209 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.47■□□□□ 0.23
Pdlim3O70209 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim3O70209 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pdlim3O70209 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim3O70209 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim3O70209 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim3O70209 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim3O70209 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Pdlim3O70209 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.46■□□□□ 0.23
Pdlim3O70209 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim3O70209 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pdlim3O70209 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.46■□□□□ 0.23
Pdlim3O70209 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.46■□□□□ 0.23
Pdlim3O70209 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim3O70209 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.46■□□□□ 0.23
Pdlim3O70209 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim3O70209 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim3O70209 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.46■□□□□ 0.23
Pdlim3O70209 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.46■□□□□ 0.23
Pdlim3O70209 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pdlim3O70209 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pdlim3O70209 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim3O70209 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim3O70209 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pdlim3O70209 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms