Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Mmp8O70138 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Mmp8O70138 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Mmp8O70138 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Mmp8O70138 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Mmp8O70138 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Mmp8O70138 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Mmp8O70138 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Mmp8O70138 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Mmp8O70138 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Mmp8O70138 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Mmp8O70138 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Mmp8O70138 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.25■■□□□ 1.15
Mmp8O70138 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Mmp8O70138 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Mmp8O70138 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Mmp8O70138 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Mmp8O70138 Fam105a-203ENSMUST00000226170 3043 ntBASIC22.25■■□□□ 1.15
Mmp8O70138 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Mmp8O70138 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Mmp8O70138 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC22.24■■□□□ 1.15
Mmp8O70138 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC22.24■■□□□ 1.15
Mmp8O70138 Flg-201ENSMUST00000050758 1488 ntBASIC22.24■■□□□ 1.15
Mmp8O70138 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Mmp8O70138 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Mmp8O70138 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC22.24■■□□□ 1.15
Mmp8O70138 Gm11927-201ENSMUST00000118472 759 ntBASIC22.24■■□□□ 1.15
Mmp8O70138 Gm15847-201ENSMUST00000121417 1065 ntBASIC22.24■■□□□ 1.15
Mmp8O70138 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC22.24■■□□□ 1.15
Mmp8O70138 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.24■■□□□ 1.15
Mmp8O70138 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC22.24■■□□□ 1.15
Mmp8O70138 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Mmp8O70138 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Mmp8O70138 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC22.24■■□□□ 1.15
Mmp8O70138 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Mmp8O70138 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Mmp8O70138 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Mmp8O70138 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Mmp8O70138 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Mmp8O70138 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Mmp8O70138 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Mmp8O70138 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Mmp8O70138 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Mmp8O70138 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC22.22■■□□□ 1.15
Mmp8O70138 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Mmp8O70138 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC22.22■■□□□ 1.15
Mmp8O70138 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.22■■□□□ 1.15
Mmp8O70138 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Mmp8O70138 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC22.22■■□□□ 1.15
Mmp8O70138 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Mmp8O70138 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Mmp8O70138 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Mmp8O70138 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC22.21■■□□□ 1.15
Mmp8O70138 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC22.21■■□□□ 1.15
Mmp8O70138 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC22.21■■□□□ 1.15
Mmp8O70138 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 Gm11249-201ENSMUST00000117071 859 ntBASIC22.21■■□□□ 1.15
Mmp8O70138 Gm27275-201ENSMUST00000184318 272 ntBASIC22.21■■□□□ 1.15
Mmp8O70138 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC22.21■■□□□ 1.15
Mmp8O70138 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Mmp8O70138 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Mmp8O70138 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Mmp8O70138 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC22.2■■□□□ 1.15
Mmp8O70138 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Mmp8O70138 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Mmp8O70138 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC22.2■■□□□ 1.14
Mmp8O70138 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.2■■□□□ 1.14
Mmp8O70138 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Mmp8O70138 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Mmp8O70138 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Mmp8O70138 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Mmp8O70138 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Mmp8O70138 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Mmp8O70138 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Mmp8O70138 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Mmp8O70138 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
Mmp8O70138 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Mmp8O70138 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Mmp8O70138 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Mmp8O70138 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Mmp8O70138 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Mmp8O70138 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Mmp8O70138 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Mmp8O70138 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Mmp8O70138 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Mmp8O70138 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Mmp8O70138 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms