Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pja1O55176 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pja1O55176 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pja1O55176 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pja1O55176 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pja1O55176 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pja1O55176 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.24■□□□□ 0.67
Pja1O55176 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pja1O55176 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pja1O55176 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pja1O55176 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pja1O55176 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.24■□□□□ 0.67
Pja1O55176 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pja1O55176 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.24■□□□□ 0.67
Pja1O55176 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.24■□□□□ 0.67
Pja1O55176 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pja1O55176 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pja1O55176 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pja1O55176 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pja1O55176 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pja1O55176 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Pja1O55176 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pja1O55176 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pja1O55176 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pja1O55176 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Pja1O55176 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pja1O55176 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pja1O55176 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pja1O55176 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Pja1O55176 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pja1O55176 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pja1O55176 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pja1O55176 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Pja1O55176 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pja1O55176 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pja1O55176 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
Pja1O55176 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pja1O55176 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pja1O55176 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.22■□□□□ 0.67
Pja1O55176 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pja1O55176 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.22■□□□□ 0.67
Pja1O55176 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pja1O55176 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Pja1O55176 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pja1O55176 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pja1O55176 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pja1O55176 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pja1O55176 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.22■□□□□ 0.67
Pja1O55176 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pja1O55176 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pja1O55176 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pja1O55176 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pja1O55176 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pja1O55176 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pja1O55176 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.21■□□□□ 0.67
Pja1O55176 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pja1O55176 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Pja1O55176 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pja1O55176 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pja1O55176 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pja1O55176 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pja1O55176 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pja1O55176 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pja1O55176 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pja1O55176 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Pja1O55176 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pja1O55176 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.2■□□□□ 0.66
Pja1O55176 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pja1O55176 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Pja1O55176 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pja1O55176 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pja1O55176 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pja1O55176 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pja1O55176 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pja1O55176 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.2■□□□□ 0.66
Pja1O55176 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.2■□□□□ 0.66
Pja1O55176 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.2■□□□□ 0.66
Pja1O55176 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pja1O55176 Gm9988-201ENSMUST00000069786 435 ntBASIC19.2■□□□□ 0.66
Pja1O55176 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.2■□□□□ 0.66
Pja1O55176 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pja1O55176 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pja1O55176 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pja1O55176 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pja1O55176 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pja1O55176 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.19■□□□□ 0.66
Pja1O55176 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pja1O55176 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pja1O55176 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pja1O55176 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pja1O55176 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pja1O55176 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.19■□□□□ 0.66
Pja1O55176 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pja1O55176 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pja1O55176 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pja1O55176 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pja1O55176 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pja1O55176 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pja1O55176 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pja1O55176 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms