Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trdmt1O55055 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trdmt1O55055 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.13■□□□□ 0.81
Trdmt1O55055 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.13■□□□□ 0.81
Trdmt1O55055 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trdmt1O55055 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trdmt1O55055 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trdmt1O55055 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trdmt1O55055 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trdmt1O55055 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trdmt1O55055 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trdmt1O55055 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trdmt1O55055 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.12■□□□□ 0.81
Trdmt1O55055 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trdmt1O55055 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trdmt1O55055 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trdmt1O55055 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.12■□□□□ 0.81
Trdmt1O55055 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Trdmt1O55055 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trdmt1O55055 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trdmt1O55055 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.12■□□□□ 0.81
Trdmt1O55055 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trdmt1O55055 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trdmt1O55055 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trdmt1O55055 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trdmt1O55055 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trdmt1O55055 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trdmt1O55055 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.11■□□□□ 0.81
Trdmt1O55055 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trdmt1O55055 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trdmt1O55055 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trdmt1O55055 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trdmt1O55055 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.11■□□□□ 0.81
Trdmt1O55055 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trdmt1O55055 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.11■□□□□ 0.81
Trdmt1O55055 Mir2861-201ENSMUST00000175539 82 ntBASIC20.11■□□□□ 0.81
Trdmt1O55055 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.11■□□□□ 0.81
Trdmt1O55055 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.11■□□□□ 0.81
Trdmt1O55055 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trdmt1O55055 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trdmt1O55055 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trdmt1O55055 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trdmt1O55055 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trdmt1O55055 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trdmt1O55055 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trdmt1O55055 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trdmt1O55055 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.1■□□□□ 0.81
Trdmt1O55055 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.1■□□□□ 0.81
Trdmt1O55055 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trdmt1O55055 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Trdmt1O55055 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.1■□□□□ 0.81
Trdmt1O55055 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trdmt1O55055 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trdmt1O55055 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
Trdmt1O55055 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trdmt1O55055 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trdmt1O55055 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trdmt1O55055 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.09■□□□□ 0.81
Trdmt1O55055 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.09■□□□□ 0.81
Trdmt1O55055 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.09■□□□□ 0.81
Trdmt1O55055 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.09■□□□□ 0.81
Trdmt1O55055 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trdmt1O55055 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trdmt1O55055 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trdmt1O55055 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trdmt1O55055 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trdmt1O55055 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.08■□□□□ 0.81
Trdmt1O55055 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trdmt1O55055 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trdmt1O55055 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trdmt1O55055 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trdmt1O55055 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trdmt1O55055 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trdmt1O55055 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trdmt1O55055 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trdmt1O55055 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trdmt1O55055 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.07■□□□□ 0.8
Trdmt1O55055 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trdmt1O55055 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trdmt1O55055 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Trdmt1O55055 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trdmt1O55055 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trdmt1O55055 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trdmt1O55055 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Trdmt1O55055 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trdmt1O55055 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trdmt1O55055 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trdmt1O55055 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trdmt1O55055 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
Trdmt1O55055 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trdmt1O55055 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trdmt1O55055 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.06■□□□□ 0.8
Trdmt1O55055 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trdmt1O55055 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.06■□□□□ 0.8
Trdmt1O55055 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.06■□□□□ 0.8
Trdmt1O55055 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trdmt1O55055 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trdmt1O55055 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trdmt1O55055 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trdmt1O55055 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms