Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Kcnu1O54982 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.38■□□□□ 0.69
Kcnu1O54982 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Kcnu1O54982 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.38■□□□□ 0.69
Kcnu1O54982 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kcnu1O54982 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.38■□□□□ 0.69
Kcnu1O54982 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kcnu1O54982 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kcnu1O54982 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kcnu1O54982 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kcnu1O54982 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kcnu1O54982 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kcnu1O54982 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Kcnu1O54982 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Kcnu1O54982 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kcnu1O54982 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Kcnu1O54982 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.37■□□□□ 0.69
Kcnu1O54982 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Kcnu1O54982 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kcnu1O54982 Gm22325-201ENSMUST00000158904 308 ntBASIC19.37■□□□□ 0.69
Kcnu1O54982 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kcnu1O54982 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kcnu1O54982 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Kcnu1O54982 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Kcnu1O54982 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Kcnu1O54982 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Kcnu1O54982 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Kcnu1O54982 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.36■□□□□ 0.69
Kcnu1O54982 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Kcnu1O54982 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.36■□□□□ 0.69
Kcnu1O54982 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Kcnu1O54982 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.36■□□□□ 0.69
Kcnu1O54982 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Kcnu1O54982 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Kcnu1O54982 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Kcnu1O54982 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Kcnu1O54982 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Kcnu1O54982 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Kcnu1O54982 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Kcnu1O54982 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Kcnu1O54982 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Kcnu1O54982 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Kcnu1O54982 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kcnu1O54982 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kcnu1O54982 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Kcnu1O54982 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.34■□□□□ 0.69
Kcnu1O54982 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kcnu1O54982 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Kcnu1O54982 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kcnu1O54982 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kcnu1O54982 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kcnu1O54982 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kcnu1O54982 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kcnu1O54982 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kcnu1O54982 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
Kcnu1O54982 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
Kcnu1O54982 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Kcnu1O54982 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kcnu1O54982 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kcnu1O54982 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kcnu1O54982 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kcnu1O54982 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.33■□□□□ 0.68
Kcnu1O54982 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.33■□□□□ 0.68
Kcnu1O54982 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Kcnu1O54982 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kcnu1O54982 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kcnu1O54982 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kcnu1O54982 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Kcnu1O54982 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Kcnu1O54982 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.32■□□□□ 0.68
Kcnu1O54982 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kcnu1O54982 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kcnu1O54982 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kcnu1O54982 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kcnu1O54982 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Kcnu1O54982 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.32■□□□□ 0.68
Kcnu1O54982 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.32■□□□□ 0.68
Kcnu1O54982 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.32■□□□□ 0.68
Kcnu1O54982 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kcnu1O54982 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kcnu1O54982 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kcnu1O54982 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kcnu1O54982 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kcnu1O54982 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kcnu1O54982 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kcnu1O54982 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kcnu1O54982 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kcnu1O54982 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kcnu1O54982 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Kcnu1O54982 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kcnu1O54982 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kcnu1O54982 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Kcnu1O54982 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kcnu1O54982 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Kcnu1O54982 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kcnu1O54982 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.3■□□□□ 0.68
Kcnu1O54982 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Kcnu1O54982 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kcnu1O54982 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Kcnu1O54982 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms