Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf13O54965 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Rnf13O54965 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf13O54965 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf13O54965 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf13O54965 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf13O54965 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf13O54965 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.49■□□□□ 0.23
Rnf13O54965 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf13O54965 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf13O54965 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf13O54965 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf13O54965 Gm27454-201ENSMUST00000185090 204 ntBASIC16.49■□□□□ 0.23
Rnf13O54965 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.49■□□□□ 0.23
Rnf13O54965 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf13O54965 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf13O54965 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.49■□□□□ 0.23
Rnf13O54965 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.49■□□□□ 0.23
Rnf13O54965 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rnf13O54965 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf13O54965 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Rnf13O54965 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf13O54965 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.48■□□□□ 0.23
Rnf13O54965 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.48■□□□□ 0.23
Rnf13O54965 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Gm40848-201ENSMUST00000221998 324 ntBASIC16.48■□□□□ 0.23
Rnf13O54965 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rnf13O54965 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rnf13O54965 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf13O54965 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.47■□□□□ 0.23
Rnf13O54965 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
Rnf13O54965 Gm26833-201ENSMUST00000180899 440 ntBASIC16.47■□□□□ 0.23
Rnf13O54965 Gm38205-201ENSMUST00000192243 258 ntBASIC16.47■□□□□ 0.23
Rnf13O54965 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rnf13O54965 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rnf13O54965 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rnf13O54965 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf13O54965 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf13O54965 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf13O54965 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf13O54965 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf13O54965 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf13O54965 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf13O54965 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf13O54965 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
Rnf13O54965 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.46■□□□□ 0.23
Rnf13O54965 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.46■□□□□ 0.23
Rnf13O54965 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.46■□□□□ 0.23
Rnf13O54965 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf13O54965 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf13O54965 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Rnf13O54965 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf13O54965 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf13O54965 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rnf13O54965 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.46■□□□□ 0.23
Rnf13O54965 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rnf13O54965 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rnf13O54965 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Rnf13O54965 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf13O54965 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf13O54965 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf13O54965 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf13O54965 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.45■□□□□ 0.22
Rnf13O54965 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf13O54965 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Rnf13O54965 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf13O54965 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf13O54965 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.45■□□□□ 0.22
Rnf13O54965 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.45■□□□□ 0.22
Rnf13O54965 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf13O54965 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf13O54965 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms