Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Gm3375-201ENSMUST00000203929 796 ntBASIC18.2■□□□□ 0.5
Phox2bO35690 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Phox2bO35690 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Phox2bO35690 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.2■□□□□ 0.5
Phox2bO35690 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Phox2bO35690 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Phox2bO35690 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Phox2bO35690 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Phox2bO35690 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Phox2bO35690 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Phox2bO35690 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Phox2bO35690 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Phox2bO35690 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Phox2bO35690 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Phox2bO35690 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Phox2bO35690 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.19■□□□□ 0.5
Phox2bO35690 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Phox2bO35690 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Phox2bO35690 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Phox2bO35690 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Phox2bO35690 Gm12382-201ENSMUST00000122005 922 ntBASIC18.19■□□□□ 0.5
Phox2bO35690 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.19■□□□□ 0.5
Phox2bO35690 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Phox2bO35690 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Phox2bO35690 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Phox2bO35690 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Phox2bO35690 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Phox2bO35690 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Phox2bO35690 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.19■□□□□ 0.5
Phox2bO35690 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Phox2bO35690 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Phox2bO35690 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Phox2bO35690 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Phox2bO35690 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Phox2bO35690 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Phox2bO35690 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Phox2bO35690 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Phox2bO35690 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Phox2bO35690 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.18■□□□□ 0.5
Phox2bO35690 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Phox2bO35690 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Phox2bO35690 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Phox2bO35690 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Phox2bO35690 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.17■□□□□ 0.5
Phox2bO35690 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Phox2bO35690 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Phox2bO35690 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Phox2bO35690 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Phox2bO35690 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Phox2bO35690 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Phox2bO35690 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.17■□□□□ 0.5
Phox2bO35690 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Phox2bO35690 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Phox2bO35690 Gm43514-201ENSMUST00000198852 424 ntBASIC18.17■□□□□ 0.5
Phox2bO35690 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Phox2bO35690 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Phox2bO35690 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Phox2bO35690 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Phox2bO35690 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Phox2bO35690 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Phox2bO35690 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Phox2bO35690 Gm11927-201ENSMUST00000118472 759 ntBASIC18.16■□□□□ 0.5
Phox2bO35690 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Phox2bO35690 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Phox2bO35690 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.16■□□□□ 0.5
Phox2bO35690 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Phox2bO35690 Odf3b-204ENSMUST00000227834 930 ntBASIC18.16■□□□□ 0.5
Phox2bO35690 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Phox2bO35690 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Phox2bO35690 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Phox2bO35690 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Phox2bO35690 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Phox2bO35690 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Phox2bO35690 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Phox2bO35690 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phox2bO35690 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phox2bO35690 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.15■□□□□ 0.5
Phox2bO35690 Gm7153-201ENSMUST00000117092 455 ntBASIC18.15■□□□□ 0.5
Phox2bO35690 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC18.15■□□□□ 0.5
Phox2bO35690 Gm17661-201ENSMUST00000170317 270 ntBASIC18.15■□□□□ 0.5
Phox2bO35690 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phox2bO35690 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phox2bO35690 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Phox2bO35690 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.15■□□□□ 0.5
Phox2bO35690 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phox2bO35690 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.15■□□□□ 0.5
Phox2bO35690 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phox2bO35690 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phox2bO35690 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Phox2bO35690 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Phox2bO35690 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Phox2bO35690 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Phox2bO35690 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.14■□□□□ 0.49
Phox2bO35690 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Phox2bO35690 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Phox2bO35690 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Phox2bO35690 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Phox2bO35690 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.14■□□□□ 0.49
Phox2bO35690 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Phox2bO35690 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms