Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Grk6-206ENSMUST00000224995 2971 ntBASIC17.75■□□□□ 0.43
Npc1O35604 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1O35604 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1O35604 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Npc1O35604 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1O35604 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Npc1O35604 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.75■□□□□ 0.43
Npc1O35604 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Npc1O35604 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1O35604 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1O35604 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1O35604 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.75■□□□□ 0.43
Npc1O35604 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Npc1O35604 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Npc1O35604 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1O35604 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1O35604 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Npc1O35604 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Npc1O35604 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.74■□□□□ 0.43
Npc1O35604 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.74■□□□□ 0.43
Npc1O35604 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1O35604 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Npc1O35604 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1O35604 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.74■□□□□ 0.43
Npc1O35604 Gm44549-201ENSMUST00000208351 577 ntBASIC17.74■□□□□ 0.43
Npc1O35604 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1O35604 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Npc1O35604 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1O35604 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1O35604 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1O35604 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Npc1O35604 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1O35604 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Npc1O35604 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Npc1O35604 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Npc1O35604 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Npc1O35604 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Npc1O35604 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Npc1O35604 Rarb-207ENSMUST00000225921 2756 ntBASIC17.73■□□□□ 0.43
Npc1O35604 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Npc1O35604 Gm12527-201ENSMUST00000117967 564 ntBASIC17.73■□□□□ 0.43
Npc1O35604 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.73■□□□□ 0.43
Npc1O35604 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Npc1O35604 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Npc1O35604 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.72■□□□□ 0.43
Npc1O35604 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1O35604 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Npc1O35604 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1O35604 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1O35604 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.72■□□□□ 0.43
Npc1O35604 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Npc1O35604 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.72■□□□□ 0.43
Npc1O35604 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.72■□□□□ 0.43
Npc1O35604 Gm2559-201ENSMUST00000201323 363 ntBASIC17.72■□□□□ 0.43
Npc1O35604 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1O35604 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.72■□□□□ 0.43
Npc1O35604 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1O35604 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Npc1O35604 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1O35604 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1O35604 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1O35604 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.72■□□□□ 0.43
Npc1O35604 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1O35604 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.71■□□□□ 0.43
Npc1O35604 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1O35604 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1O35604 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Npc1O35604 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1O35604 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.71■□□□□ 0.43
Npc1O35604 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.71■□□□□ 0.43
Npc1O35604 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1O35604 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Npc1O35604 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1O35604 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1O35604 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Npc1O35604 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.7■□□□□ 0.42
Npc1O35604 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Npc1O35604 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1O35604 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1O35604 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Npc1O35604 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1O35604 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1O35604 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.7■□□□□ 0.42
Npc1O35604 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1O35604 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1O35604 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Npc1O35604 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1O35604 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Npc1O35604 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Npc1O35604 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1O35604 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1O35604 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1O35604 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Npc1O35604 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Npc1O35604 Gm8520-201ENSMUST00000186517 868 ntBASIC17.69■□□□□ 0.42
Npc1O35604 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Npc1O35604 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1O35604 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Npc1O35604 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.69■□□□□ 0.42
Npc1O35604 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms