Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cl1O35188 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.08■□□□□ 0.32
Cx3cl1O35188 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.08■□□□□ 0.32
Cx3cl1O35188 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cl1O35188 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cl1O35188 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cl1O35188 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cl1O35188 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cl1O35188 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cl1O35188 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cl1O35188 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cx3cl1O35188 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.07■□□□□ 0.32
Cx3cl1O35188 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cx3cl1O35188 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.07■□□□□ 0.32
Cx3cl1O35188 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.07■□□□□ 0.32
Cx3cl1O35188 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.07■□□□□ 0.32
Cx3cl1O35188 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cx3cl1O35188 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cx3cl1O35188 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cx3cl1O35188 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cx3cl1O35188 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cx3cl1O35188 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Cx3cl1O35188 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cx3cl1O35188 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cl1O35188 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.06■□□□□ 0.32
Cx3cl1O35188 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cx3cl1O35188 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cl1O35188 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cl1O35188 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Cx3cl1O35188 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cx3cl1O35188 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cl1O35188 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.05■□□□□ 0.32
Cx3cl1O35188 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cl1O35188 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Cx3cl1O35188 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cl1O35188 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cl1O35188 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cl1O35188 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cx3cl1O35188 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cl1O35188 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.04■□□□□ 0.32
Cx3cl1O35188 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.04■□□□□ 0.32
Cx3cl1O35188 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.04■□□□□ 0.32
Cx3cl1O35188 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cx3cl1O35188 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Gm22325-201ENSMUST00000158904 308 ntBASIC17.03■□□□□ 0.32
Cx3cl1O35188 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cl1O35188 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cx3cl1O35188 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cx3cl1O35188 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms