Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 Tgds-204ENSMUST00000228543 1594 ntBASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfrsf11bO08712 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Nespas-201ENSMUST00000143738 1083 ntBASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfrsf11bO08712 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf11bO08712 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf11bO08712 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf11bO08712 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
Tnfrsf11bO08712 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf11bO08712 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.48■□□□□ 0.55
Tnfrsf11bO08712 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.48■□□□□ 0.55
Tnfrsf11bO08712 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf11bO08712 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf11bO08712 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfrsf11bO08712 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.47■□□□□ 0.55
Tnfrsf11bO08712 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Tnfrsf11bO08712 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.46■□□□□ 0.55
Tnfrsf11bO08712 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf11bO08712 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Tnfrsf11bO08712 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Tnfrsf11bO08712 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
Tnfrsf11bO08712 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Tnfrsf11bO08712 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Tnfrsf11bO08712 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf11bO08712 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfrsf11bO08712 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tnfrsf11bO08712 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Gm10033-202ENSMUST00000211874 928 ntBASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfrsf11bO08712 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 Gm22325-201ENSMUST00000158904 308 ntBASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 Gm7514-201ENSMUST00000209475 934 ntBASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfrsf11bO08712 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Tnfrsf11bO08712 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf11bO08712 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Tnfrsf11bO08712 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf11bO08712 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Tnfrsf11bO08712 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfrsf11bO08712 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms