Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Raet1bO08603 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1bO08603 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1bO08603 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1bO08603 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.11■□□□□ 0.17
Raet1bO08603 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1bO08603 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.11■□□□□ 0.17
Raet1bO08603 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Raet1bO08603 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Raet1bO08603 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1bO08603 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1bO08603 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1bO08603 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Raet1bO08603 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Raet1bO08603 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1bO08603 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1bO08603 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1bO08603 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Raet1bO08603 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1bO08603 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Raet1bO08603 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Raet1bO08603 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1bO08603 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1bO08603 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1bO08603 Gm7290-201ENSMUST00000104990 617 ntBASIC16.1■□□□□ 0.17
Raet1bO08603 Gm12918-201ENSMUST00000120234 636 ntBASIC16.1■□□□□ 0.17
Raet1bO08603 Gm15710-201ENSMUST00000121821 636 ntBASIC16.1■□□□□ 0.17
Raet1bO08603 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1bO08603 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.1■□□□□ 0.17
Raet1bO08603 Gm5075-201ENSMUST00000196916 622 ntBASIC16.1■□□□□ 0.17
Raet1bO08603 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.1■□□□□ 0.17
Raet1bO08603 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Raet1bO08603 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.1■□□□□ 0.17
Raet1bO08603 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.1■□□□□ 0.17
Raet1bO08603 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1bO08603 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1bO08603 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1bO08603 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1bO08603 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Raet1bO08603 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Raet1bO08603 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.1■□□□□ 0.17
Raet1bO08603 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Raet1bO08603 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.1■□□□□ 0.17
Raet1bO08603 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1bO08603 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1bO08603 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1bO08603 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
Raet1bO08603 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1bO08603 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1bO08603 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Raet1bO08603 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1bO08603 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Raet1bO08603 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Raet1bO08603 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Raet1bO08603 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Raet1bO08603 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1bO08603 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.09■□□□□ 0.17
Raet1bO08603 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1bO08603 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1bO08603 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1bO08603 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.09■□□□□ 0.17
Raet1bO08603 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1bO08603 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1bO08603 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1bO08603 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Raet1bO08603 Grk6-206ENSMUST00000224995 2971 ntBASIC16.08■□□□□ 0.17
Raet1bO08603 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.08■□□□□ 0.17
Raet1bO08603 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Raet1bO08603 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.08■□□□□ 0.16
Raet1bO08603 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Raet1bO08603 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1bO08603 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1bO08603 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1bO08603 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Raet1bO08603 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1bO08603 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1bO08603 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Raet1bO08603 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Raet1bO08603 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Raet1bO08603 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Raet1bO08603 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1bO08603 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1bO08603 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1bO08603 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.07■□□□□ 0.16
Raet1bO08603 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1bO08603 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1bO08603 Gm6211-202ENSMUST00000167849 925 ntBASIC16.07■□□□□ 0.16
Raet1bO08603 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1bO08603 Gm7291-201ENSMUST00000199147 382 ntBASIC16.07■□□□□ 0.16
Raet1bO08603 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.07■□□□□ 0.16
Raet1bO08603 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1bO08603 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1bO08603 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1bO08603 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1bO08603 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Raet1bO08603 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1bO08603 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1bO08603 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1bO08603 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1bO08603 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms