Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
AlyrefO08583 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
AlyrefO08583 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.33■□□□□ 0.52
AlyrefO08583 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AlyrefO08583 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AlyrefO08583 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
AlyrefO08583 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AlyrefO08583 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AlyrefO08583 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AlyrefO08583 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AlyrefO08583 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AlyrefO08583 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
AlyrefO08583 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
AlyrefO08583 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
AlyrefO08583 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
AlyrefO08583 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.32■□□□□ 0.52
AlyrefO08583 Gm18958-201ENSMUST00000174258 762 ntBASIC18.32■□□□□ 0.52
AlyrefO08583 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.32■□□□□ 0.52
AlyrefO08583 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AlyrefO08583 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AlyrefO08583 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AlyrefO08583 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AlyrefO08583 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AlyrefO08583 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AlyrefO08583 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AlyrefO08583 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.31■□□□□ 0.52
AlyrefO08583 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
AlyrefO08583 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.31■□□□□ 0.52
AlyrefO08583 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AlyrefO08583 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AlyrefO08583 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
AlyrefO08583 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AlyrefO08583 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AlyrefO08583 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.31■□□□□ 0.52
AlyrefO08583 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.31■□□□□ 0.52
AlyrefO08583 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AlyrefO08583 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AlyrefO08583 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
AlyrefO08583 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AlyrefO08583 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AlyrefO08583 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
AlyrefO08583 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AlyrefO08583 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.3■□□□□ 0.52
AlyrefO08583 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
AlyrefO08583 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AlyrefO08583 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
AlyrefO08583 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.3■□□□□ 0.52
AlyrefO08583 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
AlyrefO08583 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
AlyrefO08583 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
AlyrefO08583 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AlyrefO08583 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AlyrefO08583 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AlyrefO08583 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.29■□□□□ 0.52
AlyrefO08583 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AlyrefO08583 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.29■□□□□ 0.52
AlyrefO08583 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AlyrefO08583 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AlyrefO08583 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AlyrefO08583 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.29■□□□□ 0.52
AlyrefO08583 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AlyrefO08583 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AlyrefO08583 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
AlyrefO08583 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AlyrefO08583 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AlyrefO08583 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AlyrefO08583 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AlyrefO08583 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AlyrefO08583 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AlyrefO08583 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
AlyrefO08583 Mir5130-201ENSMUST00000175160 84 ntBASIC18.28■□□□□ 0.52
AlyrefO08583 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
AlyrefO08583 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
AlyrefO08583 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
AlyrefO08583 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AlyrefO08583 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AlyrefO08583 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AlyrefO08583 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
AlyrefO08583 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.27■□□□□ 0.52
AlyrefO08583 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AlyrefO08583 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
AlyrefO08583 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
AlyrefO08583 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AlyrefO08583 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AlyrefO08583 Gm22697-201ENSMUST00000175194 63 ntBASIC18.27■□□□□ 0.52
AlyrefO08583 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AlyrefO08583 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AlyrefO08583 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
AlyrefO08583 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
AlyrefO08583 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
AlyrefO08583 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
AlyrefO08583 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.27■□□□□ 0.51
AlyrefO08583 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AlyrefO08583 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
AlyrefO08583 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
AlyrefO08583 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
AlyrefO08583 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
AlyrefO08583 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AlyrefO08583 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
AlyrefO08583 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms