Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Gm13474-201ENSMUST00000122466 815 ntBASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Gm7791-201ENSMUST00000219066 539 ntBASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.69■□□□□ 0.9
Nkx1-1G3UXB3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Gm6991-201ENSMUST00000218475 1178 ntBASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-1G3UXB3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-1G3UXB3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-1G3UXB3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-1G3UXB3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-1G3UXB3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.66■□□□□ 0.9
Nkx1-1G3UXB3 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-1G3UXB3 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.66■□□□□ 0.9
Nkx1-1G3UXB3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-1G3UXB3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-1G3UXB3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-1G3UXB3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nkx1-1G3UXB3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Gm27742-201ENSMUST00000184667 60 ntBASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Gm27459-201ENSMUST00000184860 107 ntBASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-1G3UXB3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx1-1G3UXB3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx1-1G3UXB3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx1-1G3UXB3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx1-1G3UXB3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx1-1G3UXB3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx1-1G3UXB3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nkx1-1G3UXB3 Gm11950-201ENSMUST00000121615 838 ntBASIC20.64■□□□□ 0.89
Nkx1-1G3UXB3 Gm11452-201ENSMUST00000122376 690 ntBASIC20.64■□□□□ 0.89
Nkx1-1G3UXB3 Gm38027-201ENSMUST00000192315 235 ntBASIC20.64■□□□□ 0.89
Nkx1-1G3UXB3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx1-1G3UXB3 Gm43347-201ENSMUST00000200226 580 ntBASIC20.64■□□□□ 0.89
Nkx1-1G3UXB3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.64■□□□□ 0.89
Nkx1-1G3UXB3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.64■□□□□ 0.89
Nkx1-1G3UXB3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx1-1G3UXB3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx1-1G3UXB3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx1-1G3UXB3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx1-1G3UXB3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx1-1G3UXB3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.63■□□□□ 0.89
Nkx1-1G3UXB3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms