Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
R3hdm1E9Q9Q2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3hdm1E9Q9Q2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
R3hdm1E9Q9Q2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
R3hdm1E9Q9Q2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
R3hdm1E9Q9Q2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3hdm1E9Q9Q2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3hdm1E9Q9Q2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3hdm1E9Q9Q2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
R3hdm1E9Q9Q2 Gm27741-201ENSMUST00000185060 237 ntBASIC20.03■□□□□ 0.8
R3hdm1E9Q9Q2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3hdm1E9Q9Q2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3hdm1E9Q9Q2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
R3hdm1E9Q9Q2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3hdm1E9Q9Q2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.03■□□□□ 0.8
R3hdm1E9Q9Q2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
R3hdm1E9Q9Q2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3hdm1E9Q9Q2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
R3hdm1E9Q9Q2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 Gm30025-201ENSMUST00000218555 728 ntBASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
R3hdm1E9Q9Q2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
R3hdm1E9Q9Q2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
R3hdm1E9Q9Q2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
R3hdm1E9Q9Q2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
R3hdm1E9Q9Q2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
R3hdm1E9Q9Q2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
R3hdm1E9Q9Q2 Alkbh1-212ENSMUST00000185301 408 ntBASIC20■□□□□ 0.79
R3hdm1E9Q9Q2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
R3hdm1E9Q9Q2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
R3hdm1E9Q9Q2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20■□□□□ 0.79
R3hdm1E9Q9Q2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
R3hdm1E9Q9Q2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
R3hdm1E9Q9Q2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
R3hdm1E9Q9Q2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
R3hdm1E9Q9Q2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.97■□□□□ 0.79
R3hdm1E9Q9Q2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
R3hdm1E9Q9Q2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.97■□□□□ 0.79
R3hdm1E9Q9Q2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3hdm1E9Q9Q2 Gm6659-201ENSMUST00000174752 547 ntBASIC19.97■□□□□ 0.79
R3hdm1E9Q9Q2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.97■□□□□ 0.79
R3hdm1E9Q9Q2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3hdm1E9Q9Q2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
R3hdm1E9Q9Q2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3hdm1E9Q9Q2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms