Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb9E9Q5G2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb9E9Q5G2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pcdhb9E9Q5G2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pcdhb9E9Q5G2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb9E9Q5G2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb9E9Q5G2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb9E9Q5G2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb9E9Q5G2 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.46■■□□□ 1.03
Pcdhb9E9Q5G2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb9E9Q5G2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb9E9Q5G2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.45■■□□□ 1.02
Pcdhb9E9Q5G2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb9E9Q5G2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.45■■□□□ 1.02
Pcdhb9E9Q5G2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb9E9Q5G2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb9E9Q5G2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb9E9Q5G2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb9E9Q5G2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Pcdhb9E9Q5G2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
Pcdhb9E9Q5G2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb9E9Q5G2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb9E9Q5G2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb9E9Q5G2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhb9E9Q5G2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb9E9Q5G2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb9E9Q5G2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Pcdhb9E9Q5G2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.44■■□□□ 1.02
Pcdhb9E9Q5G2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.44■■□□□ 1.02
Pcdhb9E9Q5G2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb9E9Q5G2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb9E9Q5G2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb9E9Q5G2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb9E9Q5G2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhb9E9Q5G2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.43■■□□□ 1.02
Pcdhb9E9Q5G2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb9E9Q5G2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb9E9Q5G2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb9E9Q5G2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb9E9Q5G2 Gm18666-201ENSMUST00000190039 958 ntBASIC21.43■■□□□ 1.02
Pcdhb9E9Q5G2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhb9E9Q5G2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhb9E9Q5G2 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.43■■□□□ 1.02
Pcdhb9E9Q5G2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb9E9Q5G2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Pcdhb9E9Q5G2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhb9E9Q5G2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb9E9Q5G2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb9E9Q5G2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb9E9Q5G2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb9E9Q5G2 Tgds-204ENSMUST00000228543 1594 ntBASIC21.41■■□□□ 1.02
Pcdhb9E9Q5G2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb9E9Q5G2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.41■■□□□ 1.02
Pcdhb9E9Q5G2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb9E9Q5G2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb9E9Q5G2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb9E9Q5G2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb9E9Q5G2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb9E9Q5G2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb9E9Q5G2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb9E9Q5G2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb9E9Q5G2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
Pcdhb9E9Q5G2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb9E9Q5G2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb9E9Q5G2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb9E9Q5G2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb9E9Q5G2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.39■■□□□ 1.01
Pcdhb9E9Q5G2 Gm10698-201ENSMUST00000182663 604 ntBASIC21.39■■□□□ 1.01
Pcdhb9E9Q5G2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb9E9Q5G2 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms