Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syce3B5KM66 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syce3B5KM66 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Syce3B5KM66 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Syce3B5KM66 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Syce3B5KM66 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Syce3B5KM66 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.83■□□□□ 0.93
Syce3B5KM66 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Syce3B5KM66 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Syce3B5KM66 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Syce3B5KM66 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Syce3B5KM66 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.83■□□□□ 0.93
Syce3B5KM66 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Syce3B5KM66 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Syce3B5KM66 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Syce3B5KM66 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syce3B5KM66 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syce3B5KM66 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.82■□□□□ 0.92
Syce3B5KM66 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syce3B5KM66 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Syce3B5KM66 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syce3B5KM66 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syce3B5KM66 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syce3B5KM66 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syce3B5KM66 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syce3B5KM66 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syce3B5KM66 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Syce3B5KM66 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syce3B5KM66 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syce3B5KM66 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syce3B5KM66 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Syce3B5KM66 Gm12251-201ENSMUST00000117893 792 ntBASIC20.81■□□□□ 0.92
Syce3B5KM66 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.81■□□□□ 0.92
Syce3B5KM66 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.81■□□□□ 0.92
Syce3B5KM66 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Syce3B5KM66 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syce3B5KM66 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Syce3B5KM66 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.81■□□□□ 0.92
Syce3B5KM66 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Syce3B5KM66 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.8■□□□□ 0.92
Syce3B5KM66 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.8■□□□□ 0.92
Syce3B5KM66 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syce3B5KM66 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Syce3B5KM66 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Syce3B5KM66 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.79■□□□□ 0.92
Syce3B5KM66 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.79■□□□□ 0.92
Syce3B5KM66 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.79■□□□□ 0.92
Syce3B5KM66 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Syce3B5KM66 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Syce3B5KM66 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Syce3B5KM66 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Syce3B5KM66 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Syce3B5KM66 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.78■□□□□ 0.92
Syce3B5KM66 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.78■□□□□ 0.92
Syce3B5KM66 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Syce3B5KM66 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syce3B5KM66 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syce3B5KM66 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Syce3B5KM66 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syce3B5KM66 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syce3B5KM66 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syce3B5KM66 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.77■□□□□ 0.92
Syce3B5KM66 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syce3B5KM66 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syce3B5KM66 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Syce3B5KM66 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syce3B5KM66 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Syce3B5KM66 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syce3B5KM66 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syce3B5KM66 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Syce3B5KM66 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 216.6 ms