Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.87□□□□□ -0.03
Chd6A3KFM7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd6A3KFM7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd6A3KFM7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Chd6A3KFM7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd6A3KFM7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd6A3KFM7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd6A3KFM7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.86□□□□□ -0.03
Chd6A3KFM7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd6A3KFM7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chd6A3KFM7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.86□□□□□ -0.03
Chd6A3KFM7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd6A3KFM7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd6A3KFM7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.86□□□□□ -0.03
Chd6A3KFM7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd6A3KFM7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd6A3KFM7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd6A3KFM7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd6A3KFM7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd6A3KFM7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd6A3KFM7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Chd6A3KFM7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd6A3KFM7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd6A3KFM7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd6A3KFM7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd6A3KFM7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.85□□□□□ -0.03
Chd6A3KFM7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd6A3KFM7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.85□□□□□ -0.03
Chd6A3KFM7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd6A3KFM7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd6A3KFM7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Chd6A3KFM7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.85□□□□□ -0.03
Chd6A3KFM7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd6A3KFM7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd6A3KFM7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chd6A3KFM7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.84□□□□□ -0.03
Chd6A3KFM7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd6A3KFM7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.84□□□□□ -0.03
Chd6A3KFM7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd6A3KFM7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chd6A3KFM7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Chd6A3KFM7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Chd6A3KFM7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd6A3KFM7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
Chd6A3KFM7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd6A3KFM7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chd6A3KFM7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chd6A3KFM7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chd6A3KFM7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.83□□□□□ -0.03
Chd6A3KFM7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Gm16061-201ENSMUST00000122167 857 ntBASIC14.83□□□□□ -0.04
Chd6A3KFM7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chd6A3KFM7 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.82□□□□□ -0.04
Chd6A3KFM7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Chd6A3KFM7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd6A3KFM7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd6A3KFM7 Olfr129-201ENSMUST00000122318 993 ntBASIC14.82□□□□□ -0.04
Chd6A3KFM7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.82□□□□□ -0.04
Chd6A3KFM7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd6A3KFM7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd6A3KFM7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd6A3KFM7 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.82□□□□□ -0.04
Chd6A3KFM7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd6A3KFM7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd6A3KFM7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd6A3KFM7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd6A3KFM7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Chd6A3KFM7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chd6A3KFM7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Chd6A3KFM7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Chd6A3KFM7 Gm11452-201ENSMUST00000122376 690 ntBASIC14.82□□□□□ -0.04
Chd6A3KFM7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Chd6A3KFM7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.82□□□□□ -0.04
Chd6A3KFM7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Chd6A3KFM7 Gm2756-201ENSMUST00000195851 400 ntBASIC14.81□□□□□ -0.04
Chd6A3KFM7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd6A3KFM7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd6A3KFM7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd6A3KFM7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Chd6A3KFM7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chd6A3KFM7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd6A3KFM7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Chd6A3KFM7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd6A3KFM7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.81□□□□□ -0.04
Chd6A3KFM7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chd6A3KFM7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms