Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn1aA2APX8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn1aA2APX8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn1aA2APX8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn1aA2APX8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scn1aA2APX8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn1aA2APX8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn1aA2APX8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Scn1aA2APX8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn1aA2APX8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn1aA2APX8 Gm715-201ENSMUST00000117865 831 ntBASIC19.13■□□□□ 0.65
Scn1aA2APX8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.13■□□□□ 0.65
Scn1aA2APX8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.13■□□□□ 0.65
Scn1aA2APX8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
Scn1aA2APX8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Scn1aA2APX8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Scn1aA2APX8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn1aA2APX8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Scn1aA2APX8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.13■□□□□ 0.65
Scn1aA2APX8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn1aA2APX8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn1aA2APX8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.13■□□□□ 0.65
Scn1aA2APX8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn1aA2APX8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn1aA2APX8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn1aA2APX8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.13■□□□□ 0.65
Scn1aA2APX8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn1aA2APX8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.12■□□□□ 0.65
Scn1aA2APX8 Mir1199-201ENSMUST00000117015 119 ntBASIC19.12■□□□□ 0.65
Scn1aA2APX8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scn1aA2APX8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scn1aA2APX8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.12■□□□□ 0.65
Scn1aA2APX8 Gm10252-201ENSMUST00000209541 832 ntBASIC19.12■□□□□ 0.65
Scn1aA2APX8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn1aA2APX8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scn1aA2APX8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn1aA2APX8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Scn1aA2APX8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn1aA2APX8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn1aA2APX8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn1aA2APX8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scn1aA2APX8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn1aA2APX8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Scn1aA2APX8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn1aA2APX8 Gm10138-203ENSMUST00000206952 366 ntBASIC19.11■□□□□ 0.65
Scn1aA2APX8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scn1aA2APX8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn1aA2APX8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn1aA2APX8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn1aA2APX8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.1■□□□□ 0.65
Scn1aA2APX8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn1aA2APX8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn1aA2APX8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Scn1aA2APX8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn1aA2APX8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.1■□□□□ 0.65
Scn1aA2APX8 Mir6349-201ENSMUST00000184059 97 ntBASIC19.1■□□□□ 0.65
Scn1aA2APX8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn1aA2APX8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn1aA2APX8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scn1aA2APX8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scn1aA2APX8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn1aA2APX8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.09■□□□□ 0.65
Scn1aA2APX8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn1aA2APX8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn1aA2APX8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn1aA2APX8 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.09■□□□□ 0.65
Scn1aA2APX8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn1aA2APX8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn1aA2APX8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn1aA2APX8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Scn1aA2APX8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
Scn1aA2APX8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Scn1aA2APX8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Scn1aA2APX8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scn1aA2APX8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.08■□□□□ 0.64
Scn1aA2APX8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Scn1aA2APX8 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.08■□□□□ 0.64
Scn1aA2APX8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn1aA2APX8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn1aA2APX8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.08■□□□□ 0.64
Scn1aA2APX8 Gm42545-201ENSMUST00000202755 922 ntBASIC19.08■□□□□ 0.64
Scn1aA2APX8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.08■□□□□ 0.64
Scn1aA2APX8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn1aA2APX8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Scn1aA2APX8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn1aA2APX8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn1aA2APX8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn1aA2APX8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn1aA2APX8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Scn1aA2APX8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Scn1aA2APX8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.07■□□□□ 0.64
Scn1aA2APX8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.07■□□□□ 0.64
Scn1aA2APX8 Mir2861-201ENSMUST00000175539 82 ntBASIC19.07■□□□□ 0.64
Scn1aA2APX8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Scn1aA2APX8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.07■□□□□ 0.64
Scn1aA2APX8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn1aA2APX8 Fst-202ENSMUST00000223640 2612 ntBASIC19.07■□□□□ 0.64
Scn1aA2APX8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.07■□□□□ 0.64
Scn1aA2APX8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.07■□□□□ 0.64
Scn1aA2APX8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms