Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-1A0N8R0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-1A0N8R0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav12d-1A0N8R0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Gm21956-201ENSMUST00000179946 522 ntBASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-1A0N8R0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Gm26833-201ENSMUST00000180899 440 ntBASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-1A0N8R0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-1A0N8R0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav12d-1A0N8R0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms