Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm28729A0A1B0GSW2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28729A0A1B0GSW2 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.81■□□□□ 0.44
Gm28729A0A1B0GSW2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28729A0A1B0GSW2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28729A0A1B0GSW2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28729A0A1B0GSW2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm28729A0A1B0GSW2 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.81■□□□□ 0.44
Gm28729A0A1B0GSW2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gm28729A0A1B0GSW2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gm28729A0A1B0GSW2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Gm28729A0A1B0GSW2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm28729A0A1B0GSW2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28729A0A1B0GSW2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28729A0A1B0GSW2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28729A0A1B0GSW2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Gm28729A0A1B0GSW2 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.8■□□□□ 0.44
Gm28729A0A1B0GSW2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Gm28729A0A1B0GSW2 Gm6433-201ENSMUST00000118634 875 ntBASIC17.8■□□□□ 0.44
Gm28729A0A1B0GSW2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28729A0A1B0GSW2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28729A0A1B0GSW2 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.8■□□□□ 0.44
Gm28729A0A1B0GSW2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28729A0A1B0GSW2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Gm28729A0A1B0GSW2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm28729A0A1B0GSW2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28729A0A1B0GSW2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Gm12382-201ENSMUST00000122005 922 ntBASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Gm10231-201ENSMUST00000181584 441 ntBASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Gm10175-202ENSMUST00000208752 441 ntBASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Gm30025-201ENSMUST00000218555 728 ntBASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28729A0A1B0GSW2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Mir6349-201ENSMUST00000184059 97 ntBASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gm28729A0A1B0GSW2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Gm28729A0A1B0GSW2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28729A0A1B0GSW2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28729A0A1B0GSW2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28729A0A1B0GSW2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28729A0A1B0GSW2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm28729A0A1B0GSW2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm28729A0A1B0GSW2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Gm28729A0A1B0GSW2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Gm28729A0A1B0GSW2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Gm28729A0A1B0GSW2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm28729A0A1B0GSW2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Gm28729A0A1B0GSW2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28729A0A1B0GSW2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28729A0A1B0GSW2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28729A0A1B0GSW2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28729A0A1B0GSW2 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.76■□□□□ 0.43
Gm28729A0A1B0GSW2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms