Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2aA0A0J9YTW6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2aA0A0J9YTW6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2aA0A0J9YTW6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.74■□□□□ 0.27
Scn2aA0A0J9YTW6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Zfp783-201ENSMUST00000095946 670 ntBASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2aA0A0J9YTW6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2aA0A0J9YTW6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2aA0A0J9YTW6 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.71■□□□□ 0.27
Scn2aA0A0J9YTW6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.71■□□□□ 0.27
Scn2aA0A0J9YTW6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2aA0A0J9YTW6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.71■□□□□ 0.27
Scn2aA0A0J9YTW6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Scn2aA0A0J9YTW6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2aA0A0J9YTW6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2aA0A0J9YTW6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2aA0A0J9YTW6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2aA0A0J9YTW6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2aA0A0J9YTW6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Scn2aA0A0J9YTW6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Scn2aA0A0J9YTW6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Gm13158-201ENSMUST00000122007 736 ntBASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2aA0A0J9YTW6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2aA0A0J9YTW6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2aA0A0J9YTW6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2aA0A0J9YTW6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.69■□□□□ 0.26
Scn2aA0A0J9YTW6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Scn2aA0A0J9YTW6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2aA0A0J9YTW6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2aA0A0J9YTW6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2aA0A0J9YTW6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2aA0A0J9YTW6 Gm12896-201ENSMUST00000118430 226 ntBASIC16.69■□□□□ 0.26
Scn2aA0A0J9YTW6 Gm11927-201ENSMUST00000118472 759 ntBASIC16.69■□□□□ 0.26
Scn2aA0A0J9YTW6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2aA0A0J9YTW6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn2aA0A0J9YTW6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2aA0A0J9YTW6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2aA0A0J9YTW6 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.68■□□□□ 0.26
Scn2aA0A0J9YTW6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2aA0A0J9YTW6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.68■□□□□ 0.26
Scn2aA0A0J9YTW6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Scn2aA0A0J9YTW6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Scn2aA0A0J9YTW6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn2aA0A0J9YTW6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms