Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav13n-4A0A0G2JG01 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13n-4A0A0G2JG01 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gm4968-201ENSMUST00000071458 858 ntBASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.72□□□□□ -0.05
Trav13n-4A0A0G2JG01 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gm38205-201ENSMUST00000192243 258 ntBASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13n-4A0A0G2JG01 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13n-4A0A0G2JG01 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Gm20760-201ENSMUST00000179197 648 ntBASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Gm6365-201ENSMUST00000054711 744 ntBASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13n-4A0A0G2JG01 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms