Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm13148-201ENSMUST00000118892 745 ntBASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav9-4A0A0B4J1K2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-4A0A0B4J1K2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-4A0A0B4J1K2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-4A0A0B4J1K2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-4A0A0B4J1K2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-4A0A0B4J1K2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.67□□□□□ -0.22
Trav9-4A0A0B4J1K2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-4A0A0B4J1K2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-4A0A0B4J1K2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav9-4A0A0B4J1K2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav9-4A0A0B4J1K2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-4A0A0B4J1K2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav9-4A0A0B4J1K2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gm29257-201ENSMUST00000186115 639 ntBASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gm5408-201ENSMUST00000197998 747 ntBASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav9-4A0A0B4J1K2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav9-4A0A0B4J1K2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-4A0A0B4J1K2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-4A0A0B4J1K2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-4A0A0B4J1K2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-4A0A0B4J1K2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav9-4A0A0B4J1K2 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.65□□□□□ -0.22
Trav9-4A0A0B4J1K2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-4A0A0B4J1K2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav9-4A0A0B4J1K2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav9-4A0A0B4J1K2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-4A0A0B4J1K2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav9-4A0A0B4J1K2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-4A0A0B4J1K2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav9-4A0A0B4J1K2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav9-4A0A0B4J1K2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-4A0A0B4J1K2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-4A0A0B4J1K2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav9-4A0A0B4J1K2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-4A0A0B4J1K2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav9-4A0A0B4J1K2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-4A0A0B4J1K2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav9-4A0A0B4J1K2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-4A0A0B4J1K2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-4A0A0B4J1K2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-4A0A0B4J1K2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav9-4A0A0B4J1K2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav9-4A0A0B4J1K2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav9-4A0A0B4J1K2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-4A0A0B4J1K2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav9-4A0A0B4J1K2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav9-4A0A0B4J1K2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms