Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.63■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv5-43A0A0B4J1J2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.61■□□□□ 0.57
Igkv5-43A0A0B4J1J2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.61■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Igkv5-43A0A0B4J1J2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.6■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.59■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.59■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.59■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Gm42545-201ENSMUST00000202755 922 ntBASIC18.59■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv5-43A0A0B4J1J2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.59■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Igkv5-43A0A0B4J1J2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Igkv5-43A0A0B4J1J2 Gm37292-201ENSMUST00000192062 758 ntBASIC18.58■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Gm43183-201ENSMUST00000200632 547 ntBASIC18.58■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Mir1199-201ENSMUST00000117015 119 ntBASIC18.57■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.57■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.57■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.56■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Igkv5-43A0A0B4J1J2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms