Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv2A0A0B4J1G8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv2A0A0B4J1G8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv2A0A0B4J1G8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Trbv2A0A0B4J1G8 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv2A0A0B4J1G8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv2A0A0B4J1G8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv2A0A0B4J1G8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms