Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-42A0A0A6YY38 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ighv1-42A0A0A6YY38 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.81■□□□□ 0.28
Ighv1-42A0A0A6YY38 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-42A0A0A6YY38 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-42A0A0A6YY38 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-42A0A0A6YY38 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-42A0A0A6YY38 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Ighv1-42A0A0A6YY38 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-42A0A0A6YY38 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-42A0A0A6YY38 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.81■□□□□ 0.28
Ighv1-42A0A0A6YY38 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.81■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ighv1-42A0A0A6YY38 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-42A0A0A6YY38 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-42A0A0A6YY38 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-42A0A0A6YY38 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 BC021767-201ENSMUST00000126387 1716 ntBASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm15565-201ENSMUST00000118890 427 ntBASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm37292-201ENSMUST00000192062 758 ntBASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-42A0A0A6YY38 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm13836-201ENSMUST00000121159 501 ntBASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ighv1-42A0A0A6YY38 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-42A0A0A6YY38 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-42A0A0A6YY38 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-42A0A0A6YY38 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
Ighv1-42A0A0A6YY38 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-42A0A0A6YY38 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm12382-201ENSMUST00000122005 922 ntBASIC16.77■□□□□ 0.28
Ighv1-42A0A0A6YY38 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-42A0A0A6YY38 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ighv1-42A0A0A6YY38 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-42A0A0A6YY38 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms