Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gm8969-201ENSMUST00000199694 526 ntBASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Serp2-204ENSMUST00000228055 705 ntBASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbv23A0A0A6YWQ1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.1
Trbv23A0A0A6YWQ1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Trbv23A0A0A6YWQ1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv23A0A0A6YWQ1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Gm26833-201ENSMUST00000180899 440 ntBASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv23A0A0A6YWQ1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv23A0A0A6YWQ1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv23A0A0A6YWQ1 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.62■□□□□ 0.09
Trbv23A0A0A6YWQ1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv23A0A0A6YWQ1 Gm11421-201ENSMUST00000122124 294 ntBASIC15.62■□□□□ 0.09
Trbv23A0A0A6YWQ1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv23A0A0A6YWQ1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv23A0A0A6YWQ1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Trbv23A0A0A6YWQ1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv23A0A0A6YWQ1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv23A0A0A6YWQ1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Trbv23A0A0A6YWQ1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv23A0A0A6YWQ1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms