Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm42778-201ENSMUST00000199644 553 ntBASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm35558-201ENSMUST00000222675 2219 ntBASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Grk6-206ENSMUST00000224995 2971 ntBASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm13234-201ENSMUST00000120010 747 ntBASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav21-dv12A0A075B6C4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm13146-201ENSMUST00000118508 780 ntBASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Trav21-dv12A0A075B6C4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav21-dv12A0A075B6C4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav21-dv12A0A075B6C4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav21-dv12A0A075B6C4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav21-dv12A0A075B6C4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms