Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav18A0A075B656 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav18A0A075B656 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav18A0A075B656 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav18A0A075B656 Gm13146-201ENSMUST00000118508 780 ntBASIC14.92□□□□□ -0.02
Trav18A0A075B656 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav18A0A075B656 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav18A0A075B656 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav18A0A075B656 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav18A0A075B656 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav18A0A075B656 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav18A0A075B656 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav18A0A075B656 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav18A0A075B656 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.91□□□□□ -0.02
Trav18A0A075B656 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav18A0A075B656 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.91□□□□□ -0.02
Trav18A0A075B656 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav18A0A075B656 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav18A0A075B656 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.89□□□□□ -0.03
Trav18A0A075B656 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav18A0A075B656 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav18A0A075B656 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav18A0A075B656 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav18A0A075B656 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trav18A0A075B656 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav18A0A075B656 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav18A0A075B656 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav18A0A075B656 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.89□□□□□ -0.03
Trav18A0A075B656 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.89□□□□□ -0.03
Trav18A0A075B656 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav18A0A075B656 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav18A0A075B656 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav18A0A075B656 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav18A0A075B656 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav18A0A075B656 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav18A0A075B656 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav18A0A075B656 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav18A0A075B656 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav18A0A075B656 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trav18A0A075B656 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav18A0A075B656 Gm13534-201ENSMUST00000121169 513 ntBASIC14.88□□□□□ -0.03
Trav18A0A075B656 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav18A0A075B656 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Trav18A0A075B656 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.88□□□□□ -0.03
Trav18A0A075B656 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Trav18A0A075B656 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav18A0A075B656 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.87□□□□□ -0.03
Trav18A0A075B656 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav18A0A075B656 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms