Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.06□□□□□ -0.16
Trav16A0A075B653 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav16A0A075B653 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16A0A075B653 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16A0A075B653 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16A0A075B653 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16A0A075B653 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16A0A075B653 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16A0A075B653 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16A0A075B653 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16A0A075B653 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16A0A075B653 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16A0A075B653 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav16A0A075B653 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16A0A075B653 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav16A0A075B653 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16A0A075B653 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav16A0A075B653 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16A0A075B653 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16A0A075B653 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav16A0A075B653 Golgb1-201ENSMUST00000023534 498 ntBASIC14.04□□□□□ -0.16
Trav16A0A075B653 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trav16A0A075B653 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16A0A075B653 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav16A0A075B653 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav16A0A075B653 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav16A0A075B653 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.03□□□□□ -0.16
Trav16A0A075B653 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav16A0A075B653 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16A0A075B653 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16A0A075B653 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav16A0A075B653 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16A0A075B653 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16A0A075B653 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16A0A075B653 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16A0A075B653 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav16A0A075B653 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav16A0A075B653 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav16A0A075B653 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16A0A075B653 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16A0A075B653 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16A0A075B653 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav16A0A075B653 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav16A0A075B653 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16A0A075B653 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16A0A075B653 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16A0A075B653 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16A0A075B653 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16A0A075B653 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav16A0A075B653 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav16A0A075B653 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16A0A075B653 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16A0A075B653 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16A0A075B653 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16A0A075B653 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16A0A075B653 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav16A0A075B653 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16A0A075B653 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav16A0A075B653 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav16A0A075B653 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav16A0A075B653 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms