Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav14n-3A0A075B645 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav14n-3A0A075B645 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav14n-3A0A075B645 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav14n-3A0A075B645 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav14n-3A0A075B645 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav14n-3A0A075B645 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav14n-3A0A075B645 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav14n-3A0A075B645 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav14n-3A0A075B645 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav14n-3A0A075B645 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav14n-3A0A075B645 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav14n-3A0A075B645 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav14n-3A0A075B645 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav14n-3A0A075B645 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav14n-3A0A075B645 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Trav14n-3A0A075B645 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.2
Trav14n-3A0A075B645 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav14n-3A0A075B645 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
Trav14n-3A0A075B645 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav14n-3A0A075B645 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav14n-3A0A075B645 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav14n-3A0A075B645 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav14n-3A0A075B645 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav14n-3A0A075B645 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav14n-3A0A075B645 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav14n-3A0A075B645 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav14n-3A0A075B645 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav14n-3A0A075B645 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav14n-3A0A075B645 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav14n-3A0A075B645 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav14n-3A0A075B645 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav14n-3A0A075B645 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav14n-3A0A075B645 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav14n-3A0A075B645 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav14n-3A0A075B645 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms