Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav8-1A0A075B641 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav8-1A0A075B641 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Trav8-1A0A075B641 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav8-1A0A075B641 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav8-1A0A075B641 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav8-1A0A075B641 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav8-1A0A075B641 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Gm43566-201ENSMUST00000196851 808 ntBASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav8-1A0A075B641 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Gm10232-201ENSMUST00000089221 720 ntBASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav8-1A0A075B641 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav8-1A0A075B641 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav8-1A0A075B641 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms