Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-1A0A075B601 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav9-1A0A075B601 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-1A0A075B601 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-1A0A075B601 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Trav9-1A0A075B601 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-1A0A075B601 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-1A0A075B601 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-1A0A075B601 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav9-1A0A075B601 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9-1A0A075B601 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9-1A0A075B601 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9-1A0A075B601 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9-1A0A075B601 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9-1A0A075B601 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav9-1A0A075B601 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
Trav9-1A0A075B601 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9-1A0A075B601 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Trav9-1A0A075B601 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9-1A0A075B601 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9-1A0A075B601 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav9-1A0A075B601 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav9-1A0A075B601 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-1A0A075B601 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 Gm13146-201ENSMUST00000118508 780 ntBASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-1A0A075B601 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-1A0A075B601 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-1A0A075B601 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav9-1A0A075B601 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-1A0A075B601 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav9-1A0A075B601 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav9-1A0A075B601 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav9-1A0A075B601 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-1A0A075B601 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-1A0A075B601 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-1A0A075B601 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-1A0A075B601 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.17□□□□□ -0.14
Trav9-1A0A075B601 Gm13234-201ENSMUST00000120010 747 ntBASIC14.17□□□□□ -0.14
Trav9-1A0A075B601 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.17□□□□□ -0.14
Trav9-1A0A075B601 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9-1A0A075B601 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 214.5 ms