Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Trav1A0A075B5Z4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 AV356131-201ENSMUST00000206201 750 ntBASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav1A0A075B5Z4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav1A0A075B5Z4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav1A0A075B5Z4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav1A0A075B5Z4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav1A0A075B5Z4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav1A0A075B5Z4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav1A0A075B5Z4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav1A0A075B5Z4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trav1A0A075B5Z4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav1A0A075B5Z4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav1A0A075B5Z4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
Trav1A0A075B5Z4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav1A0A075B5Z4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav1A0A075B5Z4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.89■□□□□ 0.29
Trav1A0A075B5Z4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav1A0A075B5Z4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav1A0A075B5Z4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav1A0A075B5Z4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.89■□□□□ 0.29
Trav1A0A075B5Z4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.89■□□□□ 0.29
Trav1A0A075B5Z4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav1A0A075B5Z4 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.89■□□□□ 0.29
Trav1A0A075B5Z4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav1A0A075B5Z4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav1A0A075B5Z4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav1A0A075B5Z4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav1A0A075B5Z4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav1A0A075B5Z4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav1A0A075B5Z4 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.87■□□□□ 0.29
Trav1A0A075B5Z4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav1A0A075B5Z4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.87■□□□□ 0.29
Trav1A0A075B5Z4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav1A0A075B5Z4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav1A0A075B5Z4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav1A0A075B5Z4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav1A0A075B5Z4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav1A0A075B5Z4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.87■□□□□ 0.29
Trav1A0A075B5Z4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav1A0A075B5Z4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav1A0A075B5Z4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav1A0A075B5Z4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav1A0A075B5Z4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
Trav1A0A075B5Z4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav1A0A075B5Z4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav1A0A075B5Z4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav1A0A075B5Z4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav1A0A075B5Z4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav1A0A075B5Z4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.86■□□□□ 0.29
Trav1A0A075B5Z4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav1A0A075B5Z4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav1A0A075B5Z4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav1A0A075B5Z4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav1A0A075B5Z4 Gm10849-201ENSMUST00000100397 618 ntBASIC16.85■□□□□ 0.29
Trav1A0A075B5Z4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav1A0A075B5Z4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.85■□□□□ 0.29
Trav1A0A075B5Z4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.85■□□□□ 0.29
Trav1A0A075B5Z4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav1A0A075B5Z4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav1A0A075B5Z4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav1A0A075B5Z4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms