Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv4A0A075B5I2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv4A0A075B5I2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv4A0A075B5I2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv4A0A075B5I2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv4A0A075B5I2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trbv4A0A075B5I2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv4A0A075B5I2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trbv4A0A075B5I2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv4A0A075B5I2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Trbv4A0A075B5I2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv4A0A075B5I2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv4A0A075B5I2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Gm6211-202ENSMUST00000167849 925 ntBASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Gm7291-201ENSMUST00000199147 382 ntBASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Trbv4A0A075B5I2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Gm27405-201ENSMUST00000184201 112 ntBASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trbv4A0A075B5I2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv4A0A075B5I2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv4A0A075B5I2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv4A0A075B5I2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv4A0A075B5I2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv4A0A075B5I2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.22■□□□□ 0.51
Trbv4A0A075B5I2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trbv4A0A075B5I2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv4A0A075B5I2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.22■□□□□ 0.51
Trbv4A0A075B5I2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv4A0A075B5I2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
Trbv4A0A075B5I2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv4A0A075B5I2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
Trbv4A0A075B5I2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv4A0A075B5I2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.21■□□□□ 0.51
Trbv4A0A075B5I2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv4A0A075B5I2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv4A0A075B5I2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv4A0A075B5I2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trbv4A0A075B5I2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv4A0A075B5I2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv4A0A075B5I2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.21■□□□□ 0.51
Trbv4A0A075B5I2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trbv4A0A075B5I2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv4A0A075B5I2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv4A0A075B5I2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv4A0A075B5I2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv4A0A075B5I2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trbv4A0A075B5I2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv4A0A075B5I2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv4A0A075B5I2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv4A0A075B5I2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv4A0A075B5I2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.2■□□□□ 0.5
Trbv4A0A075B5I2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.2■□□□□ 0.5
Trbv4A0A075B5I2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv4A0A075B5I2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv4A0A075B5I2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv4A0A075B5I2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv4A0A075B5I2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv4A0A075B5I2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv4A0A075B5I2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv4A0A075B5I2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms