Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
H2afb2S4R1M3 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
H2afb2S4R1M3 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.55□□□□□ -1.36
H2afb2S4R1M3 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
H2afb2S4R1M3 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm16044-201ENSMUST00000118475 450 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm13207-201ENSMUST00000119862 773 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm14900-201ENSMUST00000120304 733 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm14300-201ENSMUST00000120800 946 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm12778-201ENSMUST00000122341 333 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm15501-202ENSMUST00000140687 625 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm23071-201ENSMUST00000158242 115 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm25617-201ENSMUST00000179548 133 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm8609-201ENSMUST00000182967 998 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Mir6987-201ENSMUST00000184789 73 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm37620-201ENSMUST00000192910 501 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm20926-201ENSMUST00000194457 696 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm8454-201ENSMUST00000196980 811 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm25617-202ENSMUST00000198387 132 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm9367-201ENSMUST00000205703 546 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm44896-201ENSMUST00000206190 772 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm7780-201ENSMUST00000214787 406 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
H2afb2S4R1M3 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H2afb2S4R1M3 Gm13444-201ENSMUST00000119445 522 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms