Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm22158-201ENSMUST00000158411 126 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm8550-201ENSMUST00000161621 653 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm21430-201ENSMUST00000182998 998 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm27659-201ENSMUST00000183472 98 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Mir7j-201ENSMUST00000184427 122 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm19035-202ENSMUST00000194575 959 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm43387-201ENSMUST00000196896 1066 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm4605-201ENSMUST00000203148 625 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm19596-201ENSMUST00000203685 739 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm32842-201ENSMUST00000212653 738 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm18252-203ENSMUST00000215855 757 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gcnt2-204ENSMUST00000223570 335 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 CT025579.4-201ENSMUST00000224598 627 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 AC110176.1-201ENSMUST00000226219 504 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm10601-201ENSMUST00000120436 1422 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 AC103672.2-201ENSMUST00000228146 1687 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Dgkh-206ENSMUST00000228362 3308 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm10623-201ENSMUST00000209081 2639 ntBASIC9.02□□□□□ -0.96
Ube3bQ9ES34 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Ube3bQ9ES34 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Ube3bQ9ES34 Gm20731-201ENSMUST00000193462 2288 ntBASIC9.02□□□□□ -0.96
Ube3bQ9ES34 Gm43571-201ENSMUST00000200067 3098 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm4962-201ENSMUST00000199640 2977 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm37163-201ENSMUST00000195439 1690 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm25614-201ENSMUST00000104013 133 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Defa-ps7-201ENSMUST00000117139 168 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm12988-201ENSMUST00000119054 478 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm13462-201ENSMUST00000121472 961 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm15116-201ENSMUST00000122248 663 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm24139-201ENSMUST00000122780 288 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm24011-201ENSMUST00000157732 268 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm7418-201ENSMUST00000162120 801 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm4308-201ENSMUST00000179735 914 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Mir6951-201ENSMUST00000183910 75 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm18428-201ENSMUST00000194986 791 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm45319-201ENSMUST00000210220 318 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm19709-201ENSMUST00000215403 482 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 AC167669.3-201ENSMUST00000224720 393 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 AC133283.1-201ENSMUST00000228443 859 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 AC105958.1-201ENSMUST00000214783 2144 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 AC154681.1-201ENSMUST00000225876 1735 ntBASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ube3bQ9ES34 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms